Gene Apre_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0409 
Symbol 
ID8397183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp463762 
End bp465459 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content40% 
IMG OID644994767 
Productoligoendopeptidase, M3 family 
Protein accessionYP_003152179 
Protein GI257065923 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1164] Oligoendopeptidase F 
TIGRFAM ID[TIGR02289] oligoendopeptidase, M3 family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTG AGGATTTAGT TTATGAGAGG CCTGATTTTG ATGGGCTTGT GGGAGAGATT 
TCTACCTTGC TTGATAAGCT TTGTAGGTCA AAAGATAAGG AGGAGTTTTT CAAGTTTCAC
AAGGAAATTG AAGATTTCTT CCTTAAGATA GATGAACTCT ATAATATCGT AAGTATCAGA
AATTCTATAA ATACAAAGGA CGAGTTTTAT GACGCTGAGC TTAAACTTTT CTATGAGAAT
ATGCCTCGTT TTGATGAGCT TAAGCATAGG CTTGGGACTA TTAGGCTAGA AAGTAAGTTT
AGGTCTAACT TCGAAGAAAA ATATGGCAAG ACCATTACTA TGAGAGATAA GCTCCAGGAA
GACATTTTCG ATCCTTCTAT AATGGAAGAT AGGGTAGCCG AGTCTAAGCT TGTCAATGAA
TATTATAAAT TAACCGGCGG GGCTGAGATT GAATTTAGGG GAGAAATTAA AAATATATCT
GGCCTTCTTG CCATAAGCCA GGATAGGGAT AGGGACACAC GAAAGGAAGC CTTCGAGGCT
CTTAATGGTT GGTTTGCCGC TAATATGGAA AGTCTTGATA GGATTTATGA TGATTTGATT
AAGATTAGGA CTAAAATTGC AAATAAGCTC GGCTTTGAGA CCTACACTCC TGTAGCCTAT
AAGCTTATGG GAAGGCTCGA TTGGAATAGC GAAGATGCAA GAAAGTACAG AGATCAAATT
GTAGAGCACA TAGTTCCTTT AAGTCAGAAA ATCTACGCCG ATCAGGCTCA AAGAATCGGC
ATAGAGAATA TGAAATATTA CGACCTTCCT TTAAGCTTTC TTTCAGGAAA TCCAAAACCT
ATTGGAGATG AAGCCGTCTT AGTAGCAAAG GCCCTAGAGA TGTATAAGGA ACTTTCTCAT
GAAACGGGCG AGTTTTTTGA AGCTATGATT GATAAGGGCA TGATGGATCT AACTACCAAG
GACGGCAAGG CTCCAGGTGG CTATATGACA AGTCTTCCGC TTACACAGAT GCCTTTTATC
TTCTCAAACT TTAATGGCAC AAGTGGGGAT GTGGACGTCC TAACCCATGA GGCAGGCCAC
GCATTCCAGG GCTATCTTAC AAGAGATATG TATCCTAGCG AGAACAACGA CCTAACAATG
GAGATAGCAG AGACCCACTC TATGAGCATG GAGTTTTTCA CTCATCCTTG GATGGAGGAG
TTCTTCGGAG GTGACAGTGA AAAATACTAC TACGACCATA TAGCTTCAGC CATTAAGTTT
ATTCCTTATG GAGCAAGTAT AGATGAATTC CAAGAATATG TCTACGCAAA TCCATCTGCG
AGTCCAGAAG AGAGAAGGGC TAAGTATAGG GAAATAGAGA AAAAATACCT CCCTCATTTA
GACTATGATG GAAACGAATA TTTGGAAAAT GGAGGCAGAT GGCAAAGACA GCTCCATCTT
TACACAGATC CCTTCTACTA TATCGACTAC ACCATAGCTC AGATAAACGC CTTCCAATAT
TTCCTTATGG ATATGGATAA TCACGAAAAG GCCTGGGATT CATATATTAA ATTATGTAAG
ATAAGTGCTA AGCTTCCGAC CAAGGAGGCC CTAGGAGAAG TAGGACTAGA AAGTCCATTC
GATGAGGGAA CAATAGAAAA AATCCTCCCA AAACTTACCG ATTACCTAGA AAGTTTGGAT
GAGGAAAAGA TTAAATAA
 
Protein sequence
MRFEDLVYER PDFDGLVGEI STLLDKLCRS KDKEEFFKFH KEIEDFFLKI DELYNIVSIR 
NSINTKDEFY DAELKLFYEN MPRFDELKHR LGTIRLESKF RSNFEEKYGK TITMRDKLQE
DIFDPSIMED RVAESKLVNE YYKLTGGAEI EFRGEIKNIS GLLAISQDRD RDTRKEAFEA
LNGWFAANME SLDRIYDDLI KIRTKIANKL GFETYTPVAY KLMGRLDWNS EDARKYRDQI
VEHIVPLSQK IYADQAQRIG IENMKYYDLP LSFLSGNPKP IGDEAVLVAK ALEMYKELSH
ETGEFFEAMI DKGMMDLTTK DGKAPGGYMT SLPLTQMPFI FSNFNGTSGD VDVLTHEAGH
AFQGYLTRDM YPSENNDLTM EIAETHSMSM EFFTHPWMEE FFGGDSEKYY YDHIASAIKF
IPYGASIDEF QEYVYANPSA SPEERRAKYR EIEKKYLPHL DYDGNEYLEN GGRWQRQLHL
YTDPFYYIDY TIAQINAFQY FLMDMDNHEK AWDSYIKLCK ISAKLPTKEA LGEVGLESPF
DEGTIEKILP KLTDYLESLD EEKIK