Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0397 |
Symbol | |
ID | 8397171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 449140 |
End bp | 450369 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644994755 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_003152167 |
Protein GI | 257065911 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000267322 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAGA AGAAAGTTAA AAAGAAATCG AAGCTTACCA GAAACATACT GATTGCACTA GTTTCGGCGA TTATTCTGGG TCTTCTTTTA CAAAGCAAGG CAGAGATTTT AAATGAGTAT ATCAAACCAT TCGGTGATAT ATTTCTTAAC CTAATCAAAT TTATAGTAAC ACCTATCGTA TTTTTCTCAA TAATTGGAGG AATTGTCTCC ATGAAAGATA TCAAAAAGGT CGGAGAAGTC GGAATTTTTA CCATAATTTA TTATTTTCTT ACCACATCCT GTGCCATAGT TATAGGACTT GGCTTTGCTA ACATCTTTAA GAGAGTATTT CCAGTAATAG CAACTACTAA CCTGGAGTTT GAAGTCGGGG AGAAAGTTTC CTTTATGGAT ACCCTAGTAA ACATCTTTCC TAAAAATTTC CTAACACCAA TGGTAGAGGC CAACATGCTC CAGATAATAG TAGGGGCAAT GATAGTTGGT TTTTCCATCT TACTTATCAA AAAGGAAAGC CAAGATAAGG CCATAGGAGC AGTTGAAGTC CTAAATGATA TCTTTATGAA GGCAATGGAG TTAATCCTAA GCCTATCTCC AATAGGAGTA TTTTGCTTAC TAGTTCCAGT AATAGCAGAA AATGGAGCAA TGATTATAGG ATCTCTCGCA TCAGTATTGC TTGTAGCCTA TCTAGCCTAC GCCCTACACG GCCTTGTAGT CTACTCATTT ACTATAAAGA CCTTGGCTAA AATAAGTCCT ATACAATTCT TCAAGGGCAT GGCACCAGCT ATAATGTTTG CCTTCTCATC AGCATCTTCA GTAGGAACTA TTCCAATCAA CATCAAATGC TGTGAAGAGC TTGGAGCAGA TCATGACGTA ACAAGCTTCG TCCTACCCTT AGGAGCTACC ATAAACATGG ACGGAACAGC AATCTATCAG GGAGTGTGCG CAGTCTTTAT CGCTTCTTGT TATGGGATCG ACCTAACACT TGGCCAAATG GTAAATATAG TTCTTACAGC AACACTCGCG TCCATAGGAA CAGCAGGAGT TCCAGGAAGC GGAATGATAA TGCTTGCCAT GGTCCTTCAA TCAGTAGGTC TTCCTGTAGA AGGAATCGCC CTAGTAGCAG GAATCGATAG GATATTTGAC ATGGGAAGAA CTACCCTAAA TATTACAGGA GATGCAACTG CTGCTATAAT AAATACAGAA AGACTTAGAA GAAAAGGGAA AATTGCATAA
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Protein sequence | MSEKKVKKKS KLTRNILIAL VSAIILGLLL QSKAEILNEY IKPFGDIFLN LIKFIVTPIV FFSIIGGIVS MKDIKKVGEV GIFTIIYYFL TTSCAIVIGL GFANIFKRVF PVIATTNLEF EVGEKVSFMD TLVNIFPKNF LTPMVEANML QIIVGAMIVG FSILLIKKES QDKAIGAVEV LNDIFMKAME LILSLSPIGV FCLLVPVIAE NGAMIIGSLA SVLLVAYLAY ALHGLVVYSF TIKTLAKISP IQFFKGMAPA IMFAFSSASS VGTIPINIKC CEELGADHDV TSFVLPLGAT INMDGTAIYQ GVCAVFIASC YGIDLTLGQM VNIVLTATLA SIGTAGVPGS GMIMLAMVLQ SVGLPVEGIA LVAGIDRIFD MGRTTLNITG DATAAIINTE RLRRKGKIA
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