Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0396 |
Symbol | |
ID | 8397170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 448543 |
End bp | 449058 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644994754 |
Product | NUDIX hydrolase |
Protein accession | YP_003152166 |
Protein GI | 257065910 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1443] Isopentenyldiphosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000159718 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAT TAGACTTATA TGATGAAAAT AGGATAAAGA CAGGAAAGAC CTACGTAAGA GGGGAGAAGA TGCCTGAAAA TACCTTTAGG TTAATAGTCC ATCTATTGAT TTTTGATGAT TGTGGCAATC TTCTCATCCA GAAAAGACAA AAGACAAAGT CTATGGCAAA CTTATGGGAT ATCACTTGTG GAGGAGCAGC AAGCACTGGT GAGACTAGCA AGGAAGCTAT AGCTAGAGAG CTTAGAGAAG AGTTAGGTAT TAAGTTAGAT TTTACAAATA TTAGGCCAAT TATCACAGCC AACTTCAAAT ACGGCTTTGA TGATTTCTAT CTGGTGAGGA AAAATATTAA TATTGATGAA GTAAAGCTTC AGGAAGAAGA AGTAGCTGCT TGTAAGTGGG CAAGTTTTGA TGAAGTGATC GATCTTATGG AAAGGGAGAG ATTTGTAAGA TACAAGAAAA ACTTTATTAA GCTTCTCTTT GACTTAAATT CCGATATGAG AGTAGTAGAA ATCTAG
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Protein sequence | MEILDLYDEN RIKTGKTYVR GEKMPENTFR LIVHLLIFDD CGNLLIQKRQ KTKSMANLWD ITCGGAASTG ETSKEAIARE LREELGIKLD FTNIRPIITA NFKYGFDDFY LVRKNINIDE VKLQEEEVAA CKWASFDEVI DLMERERFVR YKKNFIKLLF DLNSDMRVVE I
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