Gene Apre_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0396 
Symbol 
ID8397170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp448543 
End bp449058 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content35% 
IMG OID644994754 
ProductNUDIX hydrolase 
Protein accessionYP_003152166 
Protein GI257065910 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000159718 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAT TAGACTTATA TGATGAAAAT AGGATAAAGA CAGGAAAGAC CTACGTAAGA 
GGGGAGAAGA TGCCTGAAAA TACCTTTAGG TTAATAGTCC ATCTATTGAT TTTTGATGAT
TGTGGCAATC TTCTCATCCA GAAAAGACAA AAGACAAAGT CTATGGCAAA CTTATGGGAT
ATCACTTGTG GAGGAGCAGC AAGCACTGGT GAGACTAGCA AGGAAGCTAT AGCTAGAGAG
CTTAGAGAAG AGTTAGGTAT TAAGTTAGAT TTTACAAATA TTAGGCCAAT TATCACAGCC
AACTTCAAAT ACGGCTTTGA TGATTTCTAT CTGGTGAGGA AAAATATTAA TATTGATGAA
GTAAAGCTTC AGGAAGAAGA AGTAGCTGCT TGTAAGTGGG CAAGTTTTGA TGAAGTGATC
GATCTTATGG AAAGGGAGAG ATTTGTAAGA TACAAGAAAA ACTTTATTAA GCTTCTCTTT
GACTTAAATT CCGATATGAG AGTAGTAGAA ATCTAG
 
Protein sequence
MEILDLYDEN RIKTGKTYVR GEKMPENTFR LIVHLLIFDD CGNLLIQKRQ KTKSMANLWD 
ITCGGAASTG ETSKEAIARE LREELGIKLD FTNIRPIITA NFKYGFDDFY LVRKNINIDE
VKLQEEEVAA CKWASFDEVI DLMERERFVR YKKNFIKLLF DLNSDMRVVE I