Gene Apre_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0390 
Symbol 
ID8397164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp441505 
End bp442476 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content42% 
IMG OID644994748 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003152160 
Protein GI257065904 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.440533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT TAGAAGTAAA AGACCTTACG GTAGCCTTCC CCACAGAAAA TGGGGATAAG 
AACGCAGTAA ATCACCTATC CTTTGATCTA CATGAAAATG ACTTCGTGGG TCTTGTAGGA 
GAAAGTGGCT GCGGCAAGAC CGTAGCTACC CAAACCATCC TAGGGATCCA GCCCCAAGCG 
GCAATCGTTA AGTCAGGCTC AGTTAAGCTA AGGGACATAG AAGTTTTGGG CCTAAGTGAT 
AAAGAGTGGA AGAAGTACAG ATCACGTAAT ATAGCCACAG TCTTTCAAGA ACCTGGCTCT 
GCCCTAAATC CCTTGATGAA GGTTGGTAAG CAAATCGAAG AAGTCTTAAA AATCCACTAT 
GATTTTGATA AGGAAAAAAG AAAGAAACTT GTCCTAGAAA CTATGGAAAA ATGTGGGCTT 
AAAGATGTAG AAAGCCTCTA TAATAAGTAT CCCCACGAGC TTTCTGGAGG AATGCAACAA 
AGGATAATAA TAGCTATGAG CCTTATAGCA AATCCCAATG TTCTTATAGC AGATGAGCCG 
ACTACAGCCC TTGATGCCAA GGTCCAAGCC CAGATTATAG ATCTCTTTAA AGAAATTTCT 
ATGATTTACA AGGGAGCTAT AGTTTTTATT AGCCATGACC TTAACTTAAT AGAGCGAATC 
TCAAAGACTG TTATGATAAT GTATGCGGGA AGGATTGTCG AAAGAGGGAA GACAAGCGAT 
GTAGTAGCAA ATCCCCTCCA TCCTTATACG AAAGCCCTCC TAAAGGCTGT GCCAAACTTT 
AGAAAAAGAG GAGAGAAGCT ATACAATATC AAAGGCCATG TGCCTGACCT AAAAAACAGG 
CCTAACACAG GTTGTCCTTT CGCCGACAGA TGTGACCATG TTATGGATAT ATGTAGGGAA 
AGCTTCCCAG AAACTACGAG AGAGAAGGAC CGCGAGGTAA ACTGCCATCT CTATGGAGGA 
AATAATGGAT GA
 
Protein sequence
MKLLEVKDLT VAFPTENGDK NAVNHLSFDL HENDFVGLVG ESGCGKTVAT QTILGIQPQA 
AIVKSGSVKL RDIEVLGLSD KEWKKYRSRN IATVFQEPGS ALNPLMKVGK QIEEVLKIHY 
DFDKEKRKKL VLETMEKCGL KDVESLYNKY PHELSGGMQQ RIIIAMSLIA NPNVLIADEP 
TTALDAKVQA QIIDLFKEIS MIYKGAIVFI SHDLNLIERI SKTVMIMYAG RIVERGKTSD 
VVANPLHPYT KALLKAVPNF RKRGEKLYNI KGHVPDLKNR PNTGCPFADR CDHVMDICRE 
SFPETTREKD REVNCHLYGG NNG