| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0375 |
|---|
| Symbol | |
|---|
| ID | 8397149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 423686 |
|---|
| End bp | 424900 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644994733 |
|---|
| Product | ATP-dependent Clp protease, ATP-binding subunit ClpX |
|---|
| Protein accession | YP_003152145 |
|---|
| Protein GI | 257065889 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATT ACGAACAAAA AGAAATAAGA TGTTCTTTTT GTGGCAAGGA TAGCTCACAA
GTTAAAAGAA TTATAGCTGG TCCTAATGCT TATATTTGCA ACGAATGTGT CGACTTATGT
CACGAGATTA TAGCCCAAGA GACTAACACG GCCTCTGAGT TTTCGGCTGA TATCGACCTA
TCAACACCAA AAGAGATCAA GGAATTCTTA GACTCTTATG TTATAGGTCA AGATGATGCC
AAAAAGACCC TTTCTGTTGC AGTATATAAC CACTACAAAA GAATTAATAG CAATGAAGAA
GATAGCGACA TAGAGCTACA AAAATCAAAT ATATTAATGC TAGGTCCAAC TGGTTCAGGA
AAGACCCTCC TTGCCCAAAC CCTTGCTCGC AAGCTAAATG TACCTTTTGC TATAGCAGAT
GCGACAAGCC TTACAGAGGC AGGTTATGTA GGTGAGGATG TGGAAAATAT TATCCTAAAA
CTCGTCCAAG CCGCAGATTA CGATATCGAC ATAGCAGAAC GTGGAATTAT CTATGTAGAT
GAGATAGATA AGATCACAAG AAAAAGCGAA AATCCATCTA TAACCCGTGA TGTGTCAGGT
GAAGGTGTCC AACAAGCCCT CCTTAAGCTA ATCGAGGGAA CAGAAGCAAA TGTTCCTCCT
CAAGGAGGAA GGAAGCACCC TAGCCAAGAG TATATTCAAG TAGATACGAC AAATATTCTC
TTTATCCTAG GAGGAGCCTT CGATGGAATT GAAGATATAA TAAATAGGAG ACTTTCTGAA
AAGACCATAG GCTTTGGGGC AAGTGTTACG AAAAATGCTA GTGCAAGCCT TAAGGAAGTG
AACACAGAAG ACCTCCTTAA GTACGGACTC ATTCCGGAAT TTATAGGAAG GGTGCCTATA
GTGGTAAGCC TTGATGCTCT AGAAGTTGAC TCTTTAGTCA AAATCCTAAA GGAGCCAAAA
AACTCCTTCG TAAGACAATA CCAAAAGCTA TTCGAACTAG ATGGTGTTAA GCTTACATTT
GAGGATGAGG CATTAGAAAA GATTGCCGAA AAGGCCTACA ATCAAAAGAC TGGTGCCAGA
GGACTAAGGA CCATAATGGA AAATCTCCTC CTAGATCTCA TGTTTGAAAT TCCTTCAATA
GATGATCTAG AAGAAGTTAT TGTTACAAAA GAGTCTATAG ATGATAAGGA AAAATTAGTT
TATAAGAAAA GATAG
|
|---|
| Protein sequence | MSDYEQKEIR CSFCGKDSSQ VKRIIAGPNA YICNECVDLC HEIIAQETNT ASEFSADIDL
STPKEIKEFL DSYVIGQDDA KKTLSVAVYN HYKRINSNEE DSDIELQKSN ILMLGPTGSG
KTLLAQTLAR KLNVPFAIAD ATSLTEAGYV GEDVENIILK LVQAADYDID IAERGIIYVD
EIDKITRKSE NPSITRDVSG EGVQQALLKL IEGTEANVPP QGGRKHPSQE YIQVDTTNIL
FILGGAFDGI EDIINRRLSE KTIGFGASVT KNASASLKEV NTEDLLKYGL IPEFIGRVPI
VVSLDALEVD SLVKILKEPK NSFVRQYQKL FELDGVKLTF EDEALEKIAE KAYNQKTGAR
GLRTIMENLL LDLMFEIPSI DDLEEVIVTK ESIDDKEKLV YKKR
|
|---|
| |