Gene Apre_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0374 
Symbol 
ID8397148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp423086 
End bp423679 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content38% 
IMG OID644994732 
ProductATP-dependent Clp protease, proteolytic subunit ClpP 
Protein accessionYP_003152144 
Protein GI257065888 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCTA AAAATTATTT AGTACCAACA GTTGTAGAAC AAACAAATAG AGGCGAGAGA 
GCCTATGATA TATATTCAAG ACTTCTAAAA GACAGGATAA TCTTCCTATC AGGTGAAGTT
CGTGATGAAA TATCTGATAT TATCATAGCC CAACTACTCT TTCTAGAAAG CGAAGATCCT
GATAAGGACA TCCAATTTTA TATCAACTCT CCTGGCGGAG TTGTAACAAG CGGACTTGCT
ATATACGATA CAATGAACTA CATCAAACCT GATGTATCCA CAATCTGTAT AGGTCAAGCT
GCATCAATGG CGGCAGTCCT TCTATCATCA GGGGCTAAGG GAAAGAGATA CTCCCTACCT
AGCTCAAATA TCATGATCCA CCAACCTTCT GGTGGAGCCC AAGGTCAAGC TAGCGATATT
GTGATACAAG CTGAACAAAT AATTAAGATT AAAGAAAGAC TAAACAAGAT CCTTTCTGAT
AATACAGGAC AAAGTCTAAA GAAGATAGAA AAAGATACCG ATAGGGACTT TGCTATGACA
GCAGCTGAAG CGTTAGAGTA CGGTCTTATC GATAAAGTAA TTGAAAGTAA GTAG
 
Protein sequence
MIPKNYLVPT VVEQTNRGER AYDIYSRLLK DRIIFLSGEV RDEISDIIIA QLLFLESEDP 
DKDIQFYINS PGGVVTSGLA IYDTMNYIKP DVSTICIGQA ASMAAVLLSS GAKGKRYSLP
SSNIMIHQPS GGAQGQASDI VIQAEQIIKI KERLNKILSD NTGQSLKKIE KDTDRDFAMT
AAEALEYGLI DKVIESK