| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0359 |
|---|
| Symbol | |
|---|
| ID | 8397133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 411376 |
|---|
| End bp | 412077 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644994717 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003152129 |
|---|
| Protein GI | 257065873 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03172] probable selenium-dependent hydroxylase accessory protein YqeC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAA TAGAAGAAAT ATTTGATATT CAAAGAAATG ATATAATTTC AATAACAGGA
TCTGGGGGCA AGACGAGTCT AATGACTTAT CTTGCCCTTA GCTTGTCCAA AAAGGGTAGG
GTCCTTATGA CGACTTCAAC TAAAATCGCC CTTCCTAAAG ATCCAAGCTA TAGGACCTAT
ACTTCCTTTG ATTCTTATGT AAATAATAAG TCAGAGAGGA TAGTATGTTT GGGAGAGGAA
GTTTCAGGCA AGGGGAAGCT AAAAAGCCTG GGATGTGATA ATCTTAAGAA AGTTCTTGAT
GATTTTGATT ATGTCTTGAT AGAAGCAGAC GGTTGTAGGA ATCTTCCTCT TAAGTTTTGG
TATGATTACG AGCCTGTAAT CTATGACTTT ACGACAAAAG TTATAGGGGT TTTGCCTATT
AAAATCATTG GACGTGAGCT TAAGGAAGAT TTTACTTATA ATTATAAGGG CTTTTCAAAA
AATATAGGGA CTGGTATCAT AGATTCTAAG ATGATAAGAA GACTAATCGC TTATGATAAG
GGCTTCTACA AGGGATTTGA TGGAGGGAAA TATTTTTTCC TAAACCAGGT AGAAAGCGAG
AAGGACTTTG CAAATGTCCG AAAGATCAGG GAGGATTTTG ATTTTCCTGA TATTAAATTA
TCCTATGGAT CGATCAAGGA GGGAAAGTTT TATGAAAATT AA
|
|---|
| Protein sequence | MLKIEEIFDI QRNDIISITG SGGKTSLMTY LALSLSKKGR VLMTTSTKIA LPKDPSYRTY
TSFDSYVNNK SERIVCLGEE VSGKGKLKSL GCDNLKKVLD DFDYVLIEAD GCRNLPLKFW
YDYEPVIYDF TTKVIGVLPI KIIGRELKED FTYNYKGFSK NIGTGIIDSK MIRRLIAYDK
GFYKGFDGGK YFFLNQVESE KDFANVRKIR EDFDFPDIKL SYGSIKEGKF YEN
|
|---|
| |