| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0297 |
|---|
| Symbol | |
|---|
| ID | 8397071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 331778 |
|---|
| End bp | 332944 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644994657 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003152069 |
|---|
| Protein GI | 257065813 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000082551 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATA AAGTAAATAG AAGAAAAAGC TTAGGCTCAT CTAAGATACT TTTTACCATA
ATATCAATAC TTTTGGGACT TTTGGTAGGA GCCTTGGTTC TTGTAATAGC AGGATTTGAT
CCAATCGAAG GCTTCAAGAA TCTATTCTTG GGAGTATTTA AGAGCCCAAG GAATATGGGA
TGGGCAATTG TAACATCGAC CCCTATTATT ATGACTGGTT TGGGTGTTGC CTTCGCCTTT
AAGACTGGAC TTTTCAACAT GGGAGCAGAG GGCCAATTTA TAATTGGAAC TGTAGTAGCC
TTTCTTGTAG GCTATAATCT AAATCTACCT CCAGTTCTAC TTCCTATAGT AGCCATAGTC
CTTGCCATGG TTATCGGAGC AATTTATGGA GCTATAGCTG GTTTTATCAA GGCGAAATTC
GGCATCCACG AGGTAATCTC TACTATCATG CTCAACTGGA TTGCCTTTTA CTTCCAAAAC
TTTGTAGTTT ATAGATTTAG ACAACCAAAC TCTATGAGTT CCTTCGATGT GGCTGATAAT
GCAAAGATTA CCCTCTTTAC TGACGCTGCC AAGAGATTCG ATGGATTTTT CTCCAAGTTT
TTTAGGGCGC CAATCCACTG GGGAACTATT ATAGCCATAG TTGCTGTGAT TGTTGTTTGG
TATATCCTGA ATAAAACAAC CCTAGGTTAT GAGCTAAAGG CAGTAGGCCT CAACAAAGAA
GCAAGTCAAT ATGGAGGAAT CAACGCGGGA AATAAGATTA TTCAATCTAT GGCGATTTCT
GGAGCAATAT GCTCACTTGC AGGTGTGACC CAAGTTTTAG GCTTTACCTA CAACCTATCG
ATCCTATCTT CCATGCAAAA CTTTGGTTTC GATGGCTTGG CTGTTTCTCT TCTTGCATCA
AATAATCCTA TTGGAGTAAT ATTTTCAGGA CTCTTCTTTG GATCTTTGAA ATATGCAGGA
GGCAATCTCC AAAGAACTAT GGGAGTTCCA AGCGAAATTA TCTCAATTAT TATTGGAACT
ATTATCCTCT TTACAGCTGT GCCTTTGGTA TTTAGAATAA TAAAGGCAAA AATTAGAAAG
AAAAATTCTA AAAAGAGAAA TGAAAAAACT GCTGTAGACA TGTCTTATGT CAACAAAGAG
ATAGAAGAAA AGAAGGAGGA ATTATGA
|
|---|
| Protein sequence | MTNKVNRRKS LGSSKILFTI ISILLGLLVG ALVLVIAGFD PIEGFKNLFL GVFKSPRNMG
WAIVTSTPII MTGLGVAFAF KTGLFNMGAE GQFIIGTVVA FLVGYNLNLP PVLLPIVAIV
LAMVIGAIYG AIAGFIKAKF GIHEVISTIM LNWIAFYFQN FVVYRFRQPN SMSSFDVADN
AKITLFTDAA KRFDGFFSKF FRAPIHWGTI IAIVAVIVVW YILNKTTLGY ELKAVGLNKE
ASQYGGINAG NKIIQSMAIS GAICSLAGVT QVLGFTYNLS ILSSMQNFGF DGLAVSLLAS
NNPIGVIFSG LFFGSLKYAG GNLQRTMGVP SEIISIIIGT IILFTAVPLV FRIIKAKIRK
KNSKKRNEKT AVDMSYVNKE IEEKKEEL
|
|---|
| |