Gene Apre_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0296 
Symbol 
ID8397070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp330256 
End bp331788 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content40% 
IMG OID644994656 
ProductABC transporter related 
Protein accessionYP_003152068 
Protein GI257065812 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000067661 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT ATTTTGATAA GGCCCCAGTT GTAAGTATGA GAAACATCAC AAAGCGCTTT 
GGCTCTAAGG AAGTCTTGAC AAATATAAAC TTTGACCTTC ACAAGTGCGA GGTCCACGCT
CTCCTTGGAG AAAATGGTGC AGGCAAGACA ACGCTTATGA ATGTTCTCTA CGGCATGTTT
CCACCAAACG AGGGAAGTAT TACAATTAAT GGCAAGACCT TTGCTTCTAT GACTCCTAAA
AAGGCAATCG AAGCGGGAAT TGGTATGGTG CACCAGCACT TTATGCTTAT AGAGCCCTTG
ACTGTAACAG AAAATATTAT CCTTGGCTAT GAGAAATCCA AGGGATTATT CCTCGATAGG
AAAAAGGCTT ACGCTGAGGT AGAAAAGATA AGCAAAGAGT ACAACCTAAC AATCGACCCT
AAGGCAAAGG TCGAAGACAT ATCAGTAGGT ATGCAACAAA GGGTCGAAAT CCTAAAGGCC
CTATATCACG GGGCAGATAT CCTAATCTTT GATGAGCCTA CGGCAGTTCT TACCCCACAA
GAGATTGTGG AATTTATAGA AATAGTCAAA AGACTTACCG AGCTAGACAA GTCAGTCATA
ATTATAACTC ACAAATTATC TGAAATTAAG GCCATGGCTG ATACTTGTAC CATAATTAGG
AGAGGTAAGT TTATAGACAA GGTCGATGTC AAAAGCGTTG ACGAAAACAT CCTAGCTGAA
AAAATGGTAG GCCGTGATGT AAGCTTTAAT GTCGACAAAA AAGCAATCGA AAAGGGCGGA
GTTGTCCTAA ATATCGAGGA CTTATGGGTT AAGGATAAGA GAGGAATTGA TGCTCTAAAA
GGCCTTGACC TAAAGCTTCA CGCTGGAGAA ATTCTAGGAA TTGCTGGAGT TGATGGCAAT
GGACAGACAG AATTAATCGA TGCCATAACT GGAATGACTA AGGCAAATAG AGGAAGCGTG
AACCTAAATG GAGTAGATAT AACCAACGCT TCTACGAGAA AGATCCTTGA TACTGGTATG
AATTCTATCC CAGAAGATAG GCAAAAGAGA GGACTTATCC TAGAATATCC TATAAAGGAC
AATCTAATAC TCGAAAGAGT AGGAGAAGAG CCATTTTCTA CAAAAGGAAG ACTCAACTTC
AAAAACATAG ACGATAATGC CAAGGATTTG GTAGGGAAAT TTGATATTAG ACCAGACGAT
ATAGAAGAAA AAGCGATAAG CCTTTCTGGT GGTAACCAAC AAAAGGTAAT AATCGCAAGA
GAGATCTCAA ATAATCCTGA CGTCTTAATA GCAGCCCAAC CTACTAGGGG ACTTGATGTA
GGAGCTATAG AATTTATACA CCAATATCTA GTGGAGCTTA GAAATCAAAA CAAGGCAGTA
CTTCTTATAA GCTTCGAGCT TGATGAGATA ATGGACTTAT CAGATAGGAT CCTCGTAATC
TATGATGGTA AAATCGTAGG AGAAAAGGAC CCTAAAGAGA CAGACGAGTT TGAAATAGGA
AGACTTATGG CAGGAGGTAT CGATGACAAA TAA
 
Protein sequence
MKKYFDKAPV VSMRNITKRF GSKEVLTNIN FDLHKCEVHA LLGENGAGKT TLMNVLYGMF 
PPNEGSITIN GKTFASMTPK KAIEAGIGMV HQHFMLIEPL TVTENIILGY EKSKGLFLDR
KKAYAEVEKI SKEYNLTIDP KAKVEDISVG MQQRVEILKA LYHGADILIF DEPTAVLTPQ
EIVEFIEIVK RLTELDKSVI IITHKLSEIK AMADTCTIIR RGKFIDKVDV KSVDENILAE
KMVGRDVSFN VDKKAIEKGG VVLNIEDLWV KDKRGIDALK GLDLKLHAGE ILGIAGVDGN
GQTELIDAIT GMTKANRGSV NLNGVDITNA STRKILDTGM NSIPEDRQKR GLILEYPIKD
NLILERVGEE PFSTKGRLNF KNIDDNAKDL VGKFDIRPDD IEEKAISLSG GNQQKVIIAR
EISNNPDVLI AAQPTRGLDV GAIEFIHQYL VELRNQNKAV LLISFELDEI MDLSDRILVI
YDGKIVGEKD PKETDEFEIG RLMAGGIDDK