Gene Apre_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0292 
Symbol 
ID8397066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp325596 
End bp326180 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content39% 
IMG OID644994652 
ProductDJ-1 family protein 
Protein accessionYP_003152064 
Protein GI257065808 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00553138 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TTTTAGTTTT AGTGGCAAAT GGCAACGAGA CAATAGAGAT ATTTACAGTA 
ATTGATTATC TTAGAAGAAT TGGAGTTAAG CTTGATATAG CATCTACCGA GGAAAGTAAA
GAGCTTAAGA CAAGTCAGGA TGTTTCCTTT AAGGCAGATA TTAGCTTTTC TGATATAAAG
GAAGAAGACT ATATGGGAGT CTATATTCCA GGAGGCACAA AGGGCGCCTA TGCTATGAGG
GATAATGAAA AAGTCTTAGA CCTTCTAAGA AGATTTAACG ATGCGGGAAA AATCATAGGA
GCAATTTGTG CAGGACCAGT AGTCCTCAAT GAGGCAGGAA TTTTATCTGA CAAAAAGGCC
ACATCCTTCC CAGATATGAA AGATGAGATG GACCAGACAG GGGAGTATGT AGATAATGAG
ATTGTAGTGA CAGATGGCAA TATCACCACA GGAAGGGGAG CTGCCGTGAC CAACTACCTT
GCCCTAAGAC TTGCTTATAT AATTGGAGGA GATGAGGCAG TAGTCAAACT TAAACACGGC
ACTCAACATG AGGCAGTCGA GAAATATTTT GGCTTTGAAT ACTAA
 
Protein sequence
MNKFLVLVAN GNETIEIFTV IDYLRRIGVK LDIASTEESK ELKTSQDVSF KADISFSDIK 
EEDYMGVYIP GGTKGAYAMR DNEKVLDLLR RFNDAGKIIG AICAGPVVLN EAGILSDKKA
TSFPDMKDEM DQTGEYVDNE IVVTDGNITT GRGAAVTNYL ALRLAYIIGG DEAVVKLKHG
TQHEAVEKYF GFEY