Gene Apre_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0280 
Symbol 
ID8397054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp312939 
End bp313859 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content36% 
IMG OID644994640 
Producthomoserine O-succinyltransferase 
Protein accessionYP_003152052 
Protein GI257065796 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1897] Homoserine trans-succinylase 
TIGRFAM ID[TIGR01001] homoserine O-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTAA TAATACCAGA AGATTTAATA TCCAAAGAAA CTTTAGACAA AGAAAATATA 
TTCACCATGG TAGAAGAAAG GGCCAAGTCA CAGGATATAA GAGCCCTTAA GATTGGCATA
GTTAATCTAA TGCCAACCAA AAAGGAAACA GAAGTTCAGC TTCTAAGACT AATCTCAAAC
ACTCCCCTCC AAATCGAAAT AGATTTGATA GCGATGGCAA GCTACAAGTC TTCGAATTAT
CAAAAACATC TGGAGAAGTT TTATGTAAGC TATGAAGAAA TAAAGGATAA AAAATACGAC
GGCCTAATCA TAACCGGAGC TCCCCTAGAG CATAAGGCCT ACGACGATAT AATCTACTGG
GAGGAGCTTA AAAAAATATT TGAATTTGCA AAGAAAAATG TCTACTCGAC TCTTTTCATC
TGCTGGTCTG CCATAGCAGC CCTTGATTAT TACTACGGTG TGAATATCGA CTCCTTGGAT
AAGAAAATAT TTACAGTTAA CAGGTACTAT AAGCAAAGCT CCGATCCTCT CTTTCTGGGC
TTTGACGATA GCTTTTATAT GCCAAACTCA AGATATAAGA CAATCAGAAA GGAAGAAGTC
GAAAGAATTC CAAAGCTTAA AGTCCTCCTA GCCGATGATA AGATGGGATC TACTATAATT
AAGAGTATCG ACAACAGATT TGTCTTTAAC CTAAATCATC TAGAATACGA TACTAATACC
CTAGATGATG AATATAGGAG GGACATAAAA AAGGGACTTG GGACCAAGCC TGCCGAAAAC
TATTATCTAG ACGATGATCC AAATAAAAAA ATTATCCAGA GATGGAGATC AACTGGATAC
ATATTCTTTA ACAACTGGAT TAACCACTAT GTCTACCAAC ACACCCCATA CAAGATCTCA
GATGTAGAGA CAATTAAATA A
 
Protein sequence
MPVIIPEDLI SKETLDKENI FTMVEERAKS QDIRALKIGI VNLMPTKKET EVQLLRLISN 
TPLQIEIDLI AMASYKSSNY QKHLEKFYVS YEEIKDKKYD GLIITGAPLE HKAYDDIIYW
EELKKIFEFA KKNVYSTLFI CWSAIAALDY YYGVNIDSLD KKIFTVNRYY KQSSDPLFLG
FDDSFYMPNS RYKTIRKEEV ERIPKLKVLL ADDKMGSTII KSIDNRFVFN LNHLEYDTNT
LDDEYRRDIK KGLGTKPAEN YYLDDDPNKK IIQRWRSTGY IFFNNWINHY VYQHTPYKIS
DVETIK