Gene Apre_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0278 
Symbol 
ID8397052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp311005 
End bp312192 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content39% 
IMG OID644994638 
Productsodium:dicarboxylate symporter 
Protein accessionYP_003152050 
Protein GI257065794 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT TAAAAGAAAA TAAATCTTCC CTAATACTAT TACTGTCGAT GTTTATTGGA 
GCTATTCTAG GACTTATCTT AGGAGAATCT GCAAAGAGCC TTCAAGGAGT AGCCAATATC
TTCCTAAATC TCTTGTATGT ATCAATAGTT CCAATGATTT TCACATCAAT TGTATCTTCG
ATTACGGGGA TGAAGACTAC CAAGACTATC GGAAAGATAC TAGGACTTAT GTTTCTAATA
TTTATTATTA CAGGCCTATT TGCAGCGCTT TATATGATAG TTTTTACTCA AATACTTGAC
CCTAGCAAGA ATGCTGTCCT TAATTTCAAG GATTTTGAAA TAGAGAAGAG TCCCAGCATC
GATCTTTTAT CCATGCTTAC AGTGGATGAT TTTTCTAAAT TACTTTCCAG GGAAAATCTG
ATGGCCCTTA TAGTATTTTC CTTCTTCGTA GGACTTGCTA TATCTAAGCT TGCTGATGAG
GCAAGGCTTG TAAAGGACTT TATAGATCAA TCCTCTAAGG TCGTTACAAA GATTATTTCA
TATATAATGA AGCTTGCTCC AATAGGCTTG GGTGCATATT TTGCAGTCCT TTTAGGAGAA
AATGGCAAAC AGATTGTAGG TCCCCTATCA AGGACAATCC TGATATTTGC CCTTGCTTCA
ATCATATATT TTTTCTTTGT AAATTTCATC ATGGCCTTTA TCGGGGGAGG ACTTAAATCT
TGCAAAAAGC TATTTACATA TATGTGGCCA CCAGTTCTTA CAGCCTTTGG GACAAGTTCC
TCTGCGGCAG CCCTTCCTCC AAATCTTGAG GCAGGAAGAA AAATTGGAAT CAGAGAAGAT
GTGAATTCAA TAGTCCTTCC CATAGGGGCA AATCTCCACA AGGATGGAAC GGTCTTGATC
CAAATAATAA AGATTGCCCT CTTGTGCCCT ATATTTGGAA TAGACTTACT AGATCCTTCT
AATCTCTTGA CAGCTATAGC AGTATCAGTC ATAGCCTCAT CAGTTATGGG GGCAGTTCCA
GGAGGAGGCT ATACTGGAGA GATTTTCCTC ATATCAGCCT TTGCCTTCCC TCAAAGCTCG
ATTCCAATCA TGGTCCTAAT AGCAACCATA GTAGACCCCC TAGCCACAGC CATCAACACA
AGCACAGACC TTGGGGCAGC TATGATAGTA GAAAGATTTG TAAAATAA
 
Protein sequence
MKILKENKSS LILLLSMFIG AILGLILGES AKSLQGVANI FLNLLYVSIV PMIFTSIVSS 
ITGMKTTKTI GKILGLMFLI FIITGLFAAL YMIVFTQILD PSKNAVLNFK DFEIEKSPSI
DLLSMLTVDD FSKLLSRENL MALIVFSFFV GLAISKLADE ARLVKDFIDQ SSKVVTKIIS
YIMKLAPIGL GAYFAVLLGE NGKQIVGPLS RTILIFALAS IIYFFFVNFI MAFIGGGLKS
CKKLFTYMWP PVLTAFGTSS SAAALPPNLE AGRKIGIRED VNSIVLPIGA NLHKDGTVLI
QIIKIALLCP IFGIDLLDPS NLLTAIAVSV IASSVMGAVP GGGYTGEIFL ISAFAFPQSS
IPIMVLIATI VDPLATAINT STDLGAAMIV ERFVK