Gene Apre_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0276 
Symbol 
ID8397050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp308587 
End bp309414 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content37% 
IMG OID644994636 
ProductNLPA lipoprotein 
Protein accessionYP_003152048 
Protein GI257065792 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TATTTGGAAT TATATCGGCC CTGACCCTCG CAGTTTTAAT CACAAGCTGT 
GGCGGGGCAG ATAAAAACGA AAGCAAAGAA GCTCTTAAGC TTGGAGTAGT AGGAGAGAGA
AATGTCGAAT ACGAAGATGC CATCAAAAGA TACGAGAAGG ATACTGGCAA AAAGATTGAG
CTTGTAAGAT TTAACGATTA CAACCAACCT AACGATGCCC TAAAGGACGG TAACATCGAC
CTATCATCCT TTGCGACCTA TATATTTATA GAAGACTATA ACAAAAACCA AAATGCAAAC
TTCACTTATC TTGCGGATAC AATAATATCG CCAATGGGAG TTTACTCACA AAAAATTAAA
GAGATAGGAG AAATCCCTGA AGGAGGAAAG ATTGCAATAC CTGTAGAAGT ATCAAACAAC
TCTAGGGCCC TATACATCCT AGAATCTGCA GGAGTGATCA AGATTAAGGA AGGAAGCGGA
GACTTTATAA CCCTAGATGA CATAGCAGAA AACCCTAAAA ACATAGAGTT TGTAGAGCTT
CCAGCAGACC AAGTTTCAAG AGCCCTAGAG GATGTGGATG CAGCCCTTAT CAACTCTGAC
ATGGCTATGG AAGCAGGACT TTCACCAACA GAAGATTCAA TCTTTCTTGA AGATCCAGAA
AACGAAAGAG CCAAGAACTT TATAAATGTA ATAGCAGTAA AAGAAAATAA TAAGGATAAT
GAAGATATCA AAAATTTCAT AGAAAACTAT TATCTAACAG ATGAAACAAA AAAGGTCATA
GAAGACGAAT ACAAGGGAGC AGTAATCCCA ATATTTAAAC TAAGATAG
 
Protein sequence
MKKIFGIISA LTLAVLITSC GGADKNESKE ALKLGVVGER NVEYEDAIKR YEKDTGKKIE 
LVRFNDYNQP NDALKDGNID LSSFATYIFI EDYNKNQNAN FTYLADTIIS PMGVYSQKIK
EIGEIPEGGK IAIPVEVSNN SRALYILESA GVIKIKEGSG DFITLDDIAE NPKNIEFVEL
PADQVSRALE DVDAALINSD MAMEAGLSPT EDSIFLEDPE NERAKNFINV IAVKENNKDN
EDIKNFIENY YLTDETKKVI EDEYKGAVIP IFKLR