Gene Apre_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0245 
Symbol 
ID8397019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp279130 
End bp280272 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content37% 
IMG OID644994606 
Productglycosyl transferase family 2 
Protein accessionYP_003152018 
Protein GI257065762 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA TATTTTGGGT GTCGGCCTTT GCGATATTTT ATCCCATGAT AGGCTACCCA 
TTGACACTTT TGTTATTAGA CAAAATTATA AAAAGAAAAA ATATAAAAGA TTACACATAC
AAGCCCAAGG TTTCGGTTAT CATATCAGCT TATAATGAGG AGAAAGTCAT TGAGAAGAAG
CTCAATAATA TTATAAAAAC TGACTATCCA GACTTTGAAG TTATTATTGC AAATGATGCC
TCAAATGACA GGACGGTGGA GCTTAGTGAA AATTTTATAA AAAGTCATCC GGACTTTGAC
ATTAGAGTAA ATACTGTAAG AAATCATTTG GGCAAGACCA ACGCCCAGGA CGAGGCGGTA
GAGGTCGCCG AGGGAGAGAT TTTAGTCTTT TCTGATGCAA ATTCGATCTT TAAGGAAGAT
GCCATAAGTG AGCTTGTTTC CTATTTTACT TCAGATGATA TAGAATATGT CTGCGGGTCT
CTTATCTACA AAGAAGATGA GACGGCTTCG GTTGTAGCGG AAAATACCTA TTGGAATATG
GAACTTACTA TGAGAAAAAT CGAGTCCAAT ATTAAAACCA TAGCTGCAGG AAATGGAGCG
ATTTATGCTT GTAGGAAGAA GGACTATAGG AATTACGATC TAGTAAGCTC TCACGATTAC
GAGATGCCCC TTCACGCAGG CCTTAACGGT AAGAGGGCCC TTTATAATGA GGATGCCCTA
GCTTTTGAGA AGGCCGGATC TACTACAAGC GATGAGTTTA AGAGAAAGGT CAGGATGCAA
AGAAGGATTC TTACGAATAT TAGAACCAAT CTAAGAAGGC TAAACATTTT CAAATACGGT
TGGTTTTCTT TCTTCCACTT TAACCATAAG ACCTTAAGAT TCTTGCAGGC TTTCTTTCAT
ATAGTATTAT TTATAAGTAA TATATTTCTT ATTAGACAAG GATTTATCTA CAAGCTAATC
CTTCTAGGCC AAGTTGCTTT TCTAATTCTT GCCATTTTGG GTCAAGTAAG CAAGGCAAAA
AATAAGATCG TCTATTTTCC AAGATATTAT TCTATGATGA TGCTTGCCCA AATACTCGGA
GCAAAAAACG AGCTTACAGG TAAGAGTAAG GCAACTTGGG AAAAGGCAGA AAGTACGAGG
TAG
 
Protein sequence
MKIIFWVSAF AIFYPMIGYP LTLLLLDKII KRKNIKDYTY KPKVSVIISA YNEEKVIEKK 
LNNIIKTDYP DFEVIIANDA SNDRTVELSE NFIKSHPDFD IRVNTVRNHL GKTNAQDEAV
EVAEGEILVF SDANSIFKED AISELVSYFT SDDIEYVCGS LIYKEDETAS VVAENTYWNM
ELTMRKIESN IKTIAAGNGA IYACRKKDYR NYDLVSSHDY EMPLHAGLNG KRALYNEDAL
AFEKAGSTTS DEFKRKVRMQ RRILTNIRTN LRRLNIFKYG WFSFFHFNHK TLRFLQAFFH
IVLFISNIFL IRQGFIYKLI LLGQVAFLIL AILGQVSKAK NKIVYFPRYY SMMMLAQILG
AKNELTGKSK ATWEKAESTR