Gene Apre_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0220 
Symbol 
ID8396994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp253720 
End bp254889 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content42% 
IMG OID644994581 
Productamidohydrolase 
Protein accessionYP_003151993 
Protein GI257065737 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA AATTATCTTA CAGCGATTTA GAAGAAATTA TAGAAATTAG ACACCAAATC 
CATATGCACC CGGAAGTTTC TGACAAGGAA TATAGGACGA CTGAAATTAT AAGAGAATTT
CTAGAAAAAC TTGAAGGAGT CGAAATAATC GACTTTCCTA TAGAAACAGG GCTAATTGCA
AGGCTTAAGA CAGGAAAAGC TGGCAAGGTC ATAGGACTTA GGGCAGATAT CGACGCCCTG
GCCCAGAAGG AAGAGACCGA TATTTCCTAC AAATCAAGGG AAGAAAATAC CATGCACGCC
TGCGGCCACG ACTACCACAC AGCAAGTCTT TTGGCTGTGG CGAAACTCCT TAGCGAAAAT
AGGGATAAGC TTTCGGGAGA TGTAGTATTT ATCTTTCAAA GGTCCGAGGA AATCACCAGA
GGGGCCAAGG AATACGTAGA CAAGGGTCTT TTCGATAAGG TTAAGATCGA TAGGGTCCTA
GGCTTTCACA ATTGGCCAGA AGTCGACTTC GGGAAGGCTA TAATAAAGAA GGGATCCTTG
ATGAGTGCCA AGGTAAATTT CAAGATAGAT ATCTTCGGTA AGGGTCAGCA CGGGTCCATG
CCTCATCTTA ACATAGATCC TATAGTTTGT GCATCAAATA TAGTCATGGC CCTTCAGACC
ATAATTTCAA GAAACACCAA CCCCTTCGAC TCGATCGTCC TTTCTGTAAA TTCTATAAAT
GGAGGATCAG AAGACAATCT AGTAGTCGAT AAGACCCATC TATCTGCCAC CATTCGCTCT
CTTTCTGAGG AAAATCTCGA AAGATCCATT GAAAGGATGG AGGCCATAGT AGAAAATATG
GCAAAAGCCT ACGAATGTAA GTATGAGATT ACCTACACAG AAAAGATTCC TTCTGTATAT
AATGGAAAAG ACATGTATGA AAGGGCTCTT TCTTCCGCTA GCAAAGTCTT GGGAGAAGAG
AACATCCTAA AGGAAGGCCA CACCATGGCC AGTGAGGATT TTGCCTTCTT TATGAAGGAA
GTTCCTGGAT TTTTCTATTG GTTTGGAAGT GGGGAAGAAG GACATCCGAA AGAAGCCCTT
CACAGCAAGA ACTACTATTG CTCTGATAAG GCCATAGCCC CTGCCGTAGA AGTACTAGCC
AGAGCTGTTT TCGATTTCCA AGAATCTTAA
 
Protein sequence
MNLKLSYSDL EEIIEIRHQI HMHPEVSDKE YRTTEIIREF LEKLEGVEII DFPIETGLIA 
RLKTGKAGKV IGLRADIDAL AQKEETDISY KSREENTMHA CGHDYHTASL LAVAKLLSEN
RDKLSGDVVF IFQRSEEITR GAKEYVDKGL FDKVKIDRVL GFHNWPEVDF GKAIIKKGSL
MSAKVNFKID IFGKGQHGSM PHLNIDPIVC ASNIVMALQT IISRNTNPFD SIVLSVNSIN
GGSEDNLVVD KTHLSATIRS LSEENLERSI ERMEAIVENM AKAYECKYEI TYTEKIPSVY
NGKDMYERAL SSASKVLGEE NILKEGHTMA SEDFAFFMKE VPGFFYWFGS GEEGHPKEAL
HSKNYYCSDK AIAPAVEVLA RAVFDFQES