Gene Apre_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0218 
Symbol 
ID8396992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp251308 
End bp251844 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content37% 
IMG OID644994579 
ProductPTS system, glucose subfamily, IIA subunit 
Protein accessionYP_003151991 
Protein GI257065735 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00830] PTS system, glucose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTT TAGATAAAAT CAAGAGTGCT TTTTCTGGAG ATAGTAAGAA AAACGAAGCT 
GTAAAAGAAG TAAAAGAAGT TAAAGCTAAC GAGATAATTC TTGCTCCACT TACAGGAGAA
GTTAAGGACA TCAAGGAATG TAGCGATCCA GTGTTTGCCC AAGAAATCGT AGGCAAGGGA
GTAATCATTA TCCCAACTGA AGGAAAAGTT TATGCTCCAG TTGATGGCAA AATCTCAATG
CTTGCAGAAA CAGGACACGC TGTAGGAATC ACATCAGATG ATGGCACAGA GCTACTAATC
CACATCGGAC TTGATACAGT TGAGCTTGAA GGAAAACCAT TCGATATCAA AGCAGAAAAC
AATGCTTATG TAAAACGTGG AGATCTTCTA ATCGAATTTA ACATCGAAGA AATCAAAGCT
GCTGGTAAGG AAATCCAATC ACCAGTTATC ATAACAAACA CAGATGATAA GACAATAACA
AGCCTAAAAC TTGGTCAAAT CAACCACGGA GAAGATTTAC TAAAAATTGA AGCTTAA
 
Protein sequence
MSFLDKIKSA FSGDSKKNEA VKEVKEVKAN EIILAPLTGE VKDIKECSDP VFAQEIVGKG 
VIIIPTEGKV YAPVDGKISM LAETGHAVGI TSDDGTELLI HIGLDTVELE GKPFDIKAEN
NAYVKRGDLL IEFNIEEIKA AGKEIQSPVI ITNTDDKTIT SLKLGQINHG EDLLKIEA