Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0217 |
Symbol | |
ID | 8396991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 250441 |
End bp | 251250 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644994578 |
Product | Cof-like hydrolase |
Protein accession | YP_003151990 |
Protein GI | 257065734 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAATTAA TAGGAGTAGA TATAGACGGC ACTCTTCTAA ATAGCAAAAA CGAACTTACT GCTAGGACGA AAGCTAGTCT TATTAAGGCA AGTAGAATCG GCCACAAGGT CGCAATCATC ACAGGCAGGG ACTTTTATGC GGCAGACTTT CTGGCAAAAG ATCTTGATTT TGATAAGTTC GGAGGACTTG TCTCTTCATC TAACGGAGCC CATGTCTATG ATATGAAGGC TAAGAAAACA ATCATAAACC ACACCATAGA CCATACTCTA ATAAGAGAAA TGATAGGCTT TGCCAAAGGG CTCGGCTTTG ACTATATAAT CTATCATAAG GGAGAAATCT TAGCAGAAAA CGAACATGCT CATAGCCTAG AATATCTGGC AAGTAAAAAT AAAATGCCTT ATAGGATTAT CGAAAATTTA GAAGAGAAAA TAGATTTTCC CCTTAATAAA GTTCTTTTCT CAGCAGAGCC TTCAATCATA AATAAAAATA TAGAGAAGTT TAAGGGAAAA TTTGAAAGCC AAGTAAACCC CATCCACTCC ATGCCCCAAT TTCTCGACTG CATGCCCCTT GATATCAACA AAGGCAGGAG CATCCTAGAA ATTGCAGACT TCTTCTCGAT CGAGTCCAAG GACACCCTCG CCTTTGGAGA TGAGATTAAC GATATGGAAA TGATACAAAT GGCAGGGACT GGAATCGCTA TGGCTAACGC AAGCGAAATC TTAAAAAAAG AGGCGGACTT CATCACTCTT TCAAACGACG AGGATGGGAT AGCCTATTAT ATAGAAAAGA ATATACTTAA GGAGAAATAA
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Protein sequence | MKLIGVDIDG TLLNSKNELT ARTKASLIKA SRIGHKVAII TGRDFYAADF LAKDLDFDKF GGLVSSSNGA HVYDMKAKKT IINHTIDHTL IREMIGFAKG LGFDYIIYHK GEILAENEHA HSLEYLASKN KMPYRIIENL EEKIDFPLNK VLFSAEPSII NKNIEKFKGK FESQVNPIHS MPQFLDCMPL DINKGRSILE IADFFSIESK DTLAFGDEIN DMEMIQMAGT GIAMANASEI LKKEADFITL SNDEDGIAYY IEKNILKEK
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