Gene Apre_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0217 
Symbol 
ID8396991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp250441 
End bp251250 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content39% 
IMG OID644994578 
ProductCof-like hydrolase 
Protein accessionYP_003151990 
Protein GI257065734 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATTAA TAGGAGTAGA TATAGACGGC ACTCTTCTAA ATAGCAAAAA CGAACTTACT 
GCTAGGACGA AAGCTAGTCT TATTAAGGCA AGTAGAATCG GCCACAAGGT CGCAATCATC
ACAGGCAGGG ACTTTTATGC GGCAGACTTT CTGGCAAAAG ATCTTGATTT TGATAAGTTC
GGAGGACTTG TCTCTTCATC TAACGGAGCC CATGTCTATG ATATGAAGGC TAAGAAAACA
ATCATAAACC ACACCATAGA CCATACTCTA ATAAGAGAAA TGATAGGCTT TGCCAAAGGG
CTCGGCTTTG ACTATATAAT CTATCATAAG GGAGAAATCT TAGCAGAAAA CGAACATGCT
CATAGCCTAG AATATCTGGC AAGTAAAAAT AAAATGCCTT ATAGGATTAT CGAAAATTTA
GAAGAGAAAA TAGATTTTCC CCTTAATAAA GTTCTTTTCT CAGCAGAGCC TTCAATCATA
AATAAAAATA TAGAGAAGTT TAAGGGAAAA TTTGAAAGCC AAGTAAACCC CATCCACTCC
ATGCCCCAAT TTCTCGACTG CATGCCCCTT GATATCAACA AAGGCAGGAG CATCCTAGAA
ATTGCAGACT TCTTCTCGAT CGAGTCCAAG GACACCCTCG CCTTTGGAGA TGAGATTAAC
GATATGGAAA TGATACAAAT GGCAGGGACT GGAATCGCTA TGGCTAACGC AAGCGAAATC
TTAAAAAAAG AGGCGGACTT CATCACTCTT TCAAACGACG AGGATGGGAT AGCCTATTAT
ATAGAAAAGA ATATACTTAA GGAGAAATAA
 
Protein sequence
MKLIGVDIDG TLLNSKNELT ARTKASLIKA SRIGHKVAII TGRDFYAADF LAKDLDFDKF 
GGLVSSSNGA HVYDMKAKKT IINHTIDHTL IREMIGFAKG LGFDYIIYHK GEILAENEHA
HSLEYLASKN KMPYRIIENL EEKIDFPLNK VLFSAEPSII NKNIEKFKGK FESQVNPIHS
MPQFLDCMPL DINKGRSILE IADFFSIESK DTLAFGDEIN DMEMIQMAGT GIAMANASEI
LKKEADFITL SNDEDGIAYY IEKNILKEK