Gene Apre_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0202 
Symbol 
ID8396953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp228356 
End bp229294 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content40% 
IMG OID644994540 
ProductPTS system mannose/fructose/sorbose family IID component 
Protein accessionYP_003151975 
Protein GI257065719 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 
TIGRFAM ID[TIGR00828] PTS system, mannose/fructose/sorbose family, IID component 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000169297 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA ATATAAACAA TAATGAAGAA AGAATTGTCC TAAATCAATC TGTTCGTAGA 
AAGGTCTGCA ACCGTCACCA ATTCCTCCAA GGAACATGGA ACTACGAGAG AATGCAAAAT 
GGTGGTTGGG CCTTCTCAAT GATTCCAGCT ATCAAGGCTT TATATAAGGA CAAAGAAGAT 
CAAAAACTAG CGCTAAAAAG ACACCTTGAG TTCTACAACA CCCACCCATA CGTATCAAGC 
CCAGTAATGG GAGTAACCCT TGCTATGGAA GAAGAAAGAG CAAATGGAAC TCCAATTGAT 
GATGCGGCAA TCAACGGTGT TAAGGTTGGT ATGATGGGAC CACTTGCAGG TGTAGGAGAT 
CCAGTCTTCT GGTTTACCCT AAGACCAATT CTAGGAGCTC TAGGAGCATC CCTAGCTCTT 
TCAGGAAACC CACTAGGTCC AATAATATTC TTTGTATTTT GGAATCTAAT AAGATATATA 
TTTGAGTGGA AGACTCAAGA GATGGGATAT AAGGCAGGTA ACGAAATAAC TAAAGACCTT 
TCTGGAGGAC TTCTAGGTAG AGTTACCCTT ATGGCATCAA TCCTCGGTAT GTTTATAGTA 
GGAGCCCTTG TACAAAGATG GGTATCAATC AACTTCGCAG TAAATGTATC AGAAATCACT 
CAACAACCAG GTTCATATAT CGACTGGGCA TCTCTTCCAG CTGGAGCTGA AGGAATCAAA 
GAAGCCCTAA CTCAATATCA TAACATAGGT GCCACAGCCC TAGATCCAGT AAAGGTAACA 
ACCCTACAAG ATAACTTGGA TAGTTTGATT CCAGGTCTTG TACCACTTTT ACTAACTCTA 
GGAATCTGTA AACTTCTAAA GAAAGATGTA TCTCCAATTG CTATAATAGT TGCCCTATTC 
GTAATAGGAA TCATCGCTAG ATTCTTTGGA ATTATGTAA
 
Protein sequence
MTENINNNEE RIVLNQSVRR KVCNRHQFLQ GTWNYERMQN GGWAFSMIPA IKALYKDKED 
QKLALKRHLE FYNTHPYVSS PVMGVTLAME EERANGTPID DAAINGVKVG MMGPLAGVGD 
PVFWFTLRPI LGALGASLAL SGNPLGPIIF FVFWNLIRYI FEWKTQEMGY KAGNEITKDL 
SGGLLGRVTL MASILGMFIV GALVQRWVSI NFAVNVSEIT QQPGSYIDWA SLPAGAEGIK 
EALTQYHNIG ATALDPVKVT TLQDNLDSLI PGLVPLLLTL GICKLLKKDV SPIAIIVALF 
VIGIIARFFG IM