Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0192 |
Symbol | |
ID | 8396943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 217689 |
End bp | 218555 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644994530 |
Product | ABC transporter related |
Protein accession | YP_003151965 |
Protein GI | 257065709 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGATA TCTTAAGTCT TAGACAGGTC GAAAAACAAT TCGATAACTT TCATCTTGGT CCCTTGGACC TTGATATAAA AAGGGGTTCC GTTTTAGGCT TGATAGGTGA AAATGGAGCT GGGAAGTCTA CTAGTATCAG GCTCATTTTA TCTAATATTG AAGAGAAAGA AGGAGAAATC TACATATTTG GTAAAAAGAA GAAGGATTTG ACCGAAAATG AAAGAAAAAA GATAGCCTTT GTTTTTGATG ATTTGTATTT ACCTCAAGAT ATGAATTTAA GGCAAGTAGA AAAATTTCAT AGTTTATTTT TTGGAAGCTT ATGGGAATCA AATATGTTTT GGAATTTGGT AGAAAAATTC GATTTACCAA AAGATAAAGA CCTAAAATTA TTTTCTAGAG GAATGCAGAT GAAAACATCT CTTATCCTAG CCTTAAGTCA CAATGCAGAT TTACTTATTT TGGATGAAGC GACAAGTGGC CTTGATCCCA TAGCAAGAGA CGATATACTA GATCTTCTTC TAGATTTTAT TCAAGATGAG AATAAAAGTA TACTTATTTC TTCTCATATA TTATCTGATC TGGAAAAAAT AGCTGATGAA ATTGCCTTTA TCCATAAGGG AAAAATAATT TTTTTAGAGA ATAAAGAAGA CTTAAAAGAG AAATATGGTA TTGCTACTCT AAGTAAAGAT GAGTTTGAAA GCCTAGATAA GAGAGCTATT GTAGGAGTGA GAAAGCATTC TTTTGGAATA GAATGCCTCA TAGAAAAAAG CTTGGTCCCA GAGGGACTTG ATATGGATAA GGCTAGGATA GAAGATATTA TGGTTTTTAT GATAAAGGAG AAATACAATG AGAGCCTTGA TATATAA
|
Protein sequence | MNDILSLRQV EKQFDNFHLG PLDLDIKRGS VLGLIGENGA GKSTSIRLIL SNIEEKEGEI YIFGKKKKDL TENERKKIAF VFDDLYLPQD MNLRQVEKFH SLFFGSLWES NMFWNLVEKF DLPKDKDLKL FSRGMQMKTS LILALSHNAD LLILDEATSG LDPIARDDIL DLLLDFIQDE NKSILISSHI LSDLEKIADE IAFIHKGKII FLENKEDLKE KYGIATLSKD EFESLDKRAI VGVRKHSFGI ECLIEKSLVP EGLDMDKARI EDIMVFMIKE KYNESLDI
|
| |