Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0173 |
Symbol | |
ID | 8396924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 201676 |
End bp | 202155 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644994511 |
Product | transcriptional regulator, CarD family |
Protein accession | YP_003151946 |
Protein GI | 257065690 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA TCGGCGATAA GATCGTATAC CCAATGCATG GGGCAGGTAC CATAGACTCT ATTGAGAAAA AGGAATTTTT GGGAGAAGTA AAGGATTATT TCATCCTAAA AATGCCAATA GGAGATATGG ATATATCAAT ACCTACAAGC AAAATCAATG AGATGAACAT AAGAGATGTA ATCACTAAGG AAGAAGGAGA TGAGGTGCTT AAGATTCTCG ACGACGACCC TAGTGATATG AGCAATAATT GGACTGTAAG ATATAGACAA AACCAAGAAA TCCTAAAGAC TGGCGATATT TTTGAGATAG CCAAGATGGT AAGAAATCTT GCTATCCTTG ATAATGACAA GGGACTTTCT ACTACAGAGA AGAAACTTTT AAACAGGTCT AGGAGGATTC TTGCAAGTGA GCTAGTAATG GCAGGTTCTC TAAAGAAAGA AGAAGCGGAA GCGATGATAG ACGAGTCTAT AGGACTCTAA
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Protein sequence | MFKIGDKIVY PMHGAGTIDS IEKKEFLGEV KDYFILKMPI GDMDISIPTS KINEMNIRDV ITKEEGDEVL KILDDDPSDM SNNWTVRYRQ NQEILKTGDI FEIAKMVRNL AILDNDKGLS TTEKKLLNRS RRILASELVM AGSLKKEEAE AMIDESIGL
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