Gene Apre_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0173 
Symbol 
ID8396924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp201676 
End bp202155 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content38% 
IMG OID644994511 
Producttranscriptional regulator, CarD family 
Protein accessionYP_003151946 
Protein GI257065690 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA TCGGCGATAA GATCGTATAC CCAATGCATG GGGCAGGTAC CATAGACTCT 
ATTGAGAAAA AGGAATTTTT GGGAGAAGTA AAGGATTATT TCATCCTAAA AATGCCAATA
GGAGATATGG ATATATCAAT ACCTACAAGC AAAATCAATG AGATGAACAT AAGAGATGTA
ATCACTAAGG AAGAAGGAGA TGAGGTGCTT AAGATTCTCG ACGACGACCC TAGTGATATG
AGCAATAATT GGACTGTAAG ATATAGACAA AACCAAGAAA TCCTAAAGAC TGGCGATATT
TTTGAGATAG CCAAGATGGT AAGAAATCTT GCTATCCTTG ATAATGACAA GGGACTTTCT
ACTACAGAGA AGAAACTTTT AAACAGGTCT AGGAGGATTC TTGCAAGTGA GCTAGTAATG
GCAGGTTCTC TAAAGAAAGA AGAAGCGGAA GCGATGATAG ACGAGTCTAT AGGACTCTAA
 
Protein sequence
MFKIGDKIVY PMHGAGTIDS IEKKEFLGEV KDYFILKMPI GDMDISIPTS KINEMNIRDV 
ITKEEGDEVL KILDDDPSDM SNNWTVRYRQ NQEILKTGDI FEIAKMVRNL AILDNDKGLS
TTEKKLLNRS RRILASELVM AGSLKKEEAE AMIDESIGL