Gene Apre_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0170 
Symbol 
ID8396921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp199059 
End bp199742 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content37% 
IMG OID644994508 
ProductABC transporter related 
Protein accessionYP_003151943 
Protein GI257065687 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA TTAAGGACTT AACTATGATT TATGGAGGGC GTGCAGTCCT AGACCATGTA 
AATTTAAATA TAGAAAAAGG GCAAATAGTG GGTCTTCTCG GCGAGAATGG TTCAGGAAAG 
ACCAGCTTAC TTAGGATACT TTCAGGCCTT GAGAGAAATT ATATTGGTGA AGTTAAGATT 
AATGGGAAAA ATCCAGGAGA TGCTACAAAC GCATACGTCT CCTACCAGCC AGACCACTTG 
CCAGTTGACC CATCCCTAAA GATTTATAAG CTTGGAAAGC TTTATGGGAA TTTCTTTGCT 
GACTTTAAGG AAGAGAAATT CATAAATTTG ATTGAAGGTT TCGGTATTGA TAAGAATCTA 
AAAATCAAGG AATGTTCCAA GGGAATGAAA GAGAAGATCC AAATCGCCCT AAGTCTTTCA 
AGAAAAAGTA AAGTTTATCT TTTGGATGAG CCAATGAGTG GTATTGACCC AAAGTCTAGG 
AAGGTCATTC TTCAGACTAT AATAGATAAT TTCGACTATG AAGGAATCTT GTTAATCTCT 
ACCCACCTCA TTGGTGAAAT AGAAAAAGTC CTCGATAGGG CAATCTTTAT AGATCAAGCG 
AAAATCATAG TAAATGAAAG AGTAGACGAT ATCAGAGAGA AGAAAAATAT GGGTGTCGAA 
GAATACTTTA CGGAGGTAAT CTAG
 
Protein sequence
MIKIKDLTMI YGGRAVLDHV NLNIEKGQIV GLLGENGSGK TSLLRILSGL ERNYIGEVKI 
NGKNPGDATN AYVSYQPDHL PVDPSLKIYK LGKLYGNFFA DFKEEKFINL IEGFGIDKNL 
KIKECSKGMK EKIQIALSLS RKSKVYLLDE PMSGIDPKSR KVILQTIIDN FDYEGILLIS 
THLIGEIEKV LDRAIFIDQA KIIVNERVDD IREKKNMGVE EYFTEVI