Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0152 |
Symbol | |
ID | 8396903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 181574 |
End bp | 182446 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644994490 |
Product | ROK family protein |
Protein accession | YP_003151925 |
Protein GI | 257065669 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTTAG TATTTGATAT TGGTGGCTCA TCTACCAAGT ATGCACTTAT AGAAAATGAA AAAATAATTA TGAAAGATTC GGACAAAAGT CTTCCCACTA TGAAAGAATT TATAGAGTTT TTGGAAGATA CTACAGAATC TTTCCTTAAA GATTATGATA TAGAAGCTAT TGGATTCTCA TCTCCTGGTA GGGTTGATAG CAAAACGCTT GAGGTGGGAG GACTAAGTGC TCTCAATTAT TTAGCTGAGA AAAATTTTGC AAAACATATA GAGGATAAAT ATTCTATCCC AGTTGCTATA GAAAATGACG CAAACTGTGC GGCCCTTGGA GAAATATATT ATAAAAATCC TGAGGAAAAT CTCCTAGCCT TTGTAATAAT TGGGTCGGGT ATTGGAGGGG CCTTAGTTAA AGATTCTCAA ATTATAAGGG GCTTAAGTCT TGAAAGTGGC GAGTTTGGCT ATATGCTCTT TAACGACTTT GGTAAAATCA AAAACTTATC CAGCCTAGGG ACTTTACCAA ATGTAAGGCG CACTATAAAA GAAAAATACG GTATAGATTC GGACACATAC GAAATATTTG ATAAGTATCT TAAGAAAGAG AATCCTTTCT ATGGAGAAGT AGATAAGATG TTTACCTACC TTGCTATGGG CCTATACAAC ATAGCCTATG CTATTAATCC GGAAGTAATC TATATAGGAG GGGCTGTTTC TGAGGATGAA AGATTTATAA ATTCCATTAG AGAAAAATTA GAAGATGATA TTTTCCGAGG AGTTAGCTTA AATATTAGGC CAGTGTCCTT TTATAATGAC AATAATCTCT ATGGAGCCTA TGCGAATATT AAATTAAAAG AAGAAAGGAT AAAAAATGAT TAA
|
Protein sequence | MYLVFDIGGS STKYALIENE KIIMKDSDKS LPTMKEFIEF LEDTTESFLK DYDIEAIGFS SPGRVDSKTL EVGGLSALNY LAEKNFAKHI EDKYSIPVAI ENDANCAALG EIYYKNPEEN LLAFVIIGSG IGGALVKDSQ IIRGLSLESG EFGYMLFNDF GKIKNLSSLG TLPNVRRTIK EKYGIDSDTY EIFDKYLKKE NPFYGEVDKM FTYLAMGLYN IAYAINPEVI YIGGAVSEDE RFINSIREKL EDDIFRGVSL NIRPVSFYND NNLYGAYANI KLKEERIKND
|
| |