| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0133 |
|---|
| Symbol | |
|---|
| ID | 8396884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 158322 |
|---|
| End bp | 159407 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644994471 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003151906 |
|---|
| Protein GI | 257065650 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA TTTTAGATAA TATAGGAAAG AAATACGAAG GTCGTGAGAA CTTCACGATT
AGAAATATAA ATCTAGAGAT AGATGACAAT GATTTTTGTG TAATACTAGG ACCATCTGGT
TGCGGTAAGT CAACCCTTCT TAGGATGATT GCAGGACTTA ACTCAATTAC AGAAGGAACC
CTACGTTTTA ACGACAAGAT CATGAACACA GTTGAGCCAA AAGATAGGGA CATTGCGATG
GTTTTCCAAT CATACGCCCT CTATCCACAC ATGACAGTTT ATGATAATAT GGCCTTTTCA
TTAAATATGA AAAAGGAGAG AAAAGAAGTA ATCGATCAAA GAATACAAGA TGTGGCAAAG
ATTCTCCAGC TAGAAGACTA TCTTTACTCA AGACCATCTG ACATATCAGG AGGTCAAAGG
CAAAGGGTGG CTCTAGGAAG AGCTATCGCA AGAAACCCAG AAGTATTCCT CATGGATGAG
CCATTATCTA ACCTTGATGC CAAGTTACGT GAGCACATGA GAGTAGAGAT TGTAAGAATC
CACAATCAAT TAGATACTAC AAGTATCTAC GTAACTCACG ACCAAACTGA GGCTATGACT
ATGGCTACAA AGATAGTCCT CCTAGATAAG GGAGTTATCC AACAAGTTGG AGCTCCAAAT
GAGTTTTATC AAAAACCAAA CAACCTCTTC GTAGCAGGAT TTATAGGTTC TCCTACAATG
AATATCATCA AGGGAAAAAT CAAGGATGGT CTTTTCGTAA ATGACTCAGG AGAAATCAAG
GTAAGACCAA GTGATAAAGA CCTTGAAAAG ATTAAGTCCT ACGAAGGAAA AGTAGTTCAT
CTTGGAATAA GATCTGAAAG ATTTATAGCA GAAAAAAGAG ACTATAACTC TGTAAGTGCT
AATATAGAAG TTATAGAGTC CTTGGGTAAG GAGCAACTCC TTTATACAAA ACTTAAGGAT
GGCACAAGCC TAACCATAAG TCAACCAGGA TACTTAGACT ATGCTATAGG GGAAGATCAT
GACTTTACCC TAGACCCTGA AGCCTTACAT TTCTTTGATG GCGAGACAAC TGAAAGAATA
AACTAG
|
|---|
| Protein sequence | MKVILDNIGK KYEGRENFTI RNINLEIDDN DFCVILGPSG CGKSTLLRMI AGLNSITEGT
LRFNDKIMNT VEPKDRDIAM VFQSYALYPH MTVYDNMAFS LNMKKERKEV IDQRIQDVAK
ILQLEDYLYS RPSDISGGQR QRVALGRAIA RNPEVFLMDE PLSNLDAKLR EHMRVEIVRI
HNQLDTTSIY VTHDQTEAMT MATKIVLLDK GVIQQVGAPN EFYQKPNNLF VAGFIGSPTM
NIIKGKIKDG LFVNDSGEIK VRPSDKDLEK IKSYEGKVVH LGIRSERFIA EKRDYNSVSA
NIEVIESLGK EQLLYTKLKD GTSLTISQPG YLDYAIGEDH DFTLDPEALH FFDGETTERI
N
|
|---|
| |