Gene Apre_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0123 
Symbol 
ID8396874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp146064 
End bp146780 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content40% 
IMG OID644994461 
Productpeptidase membrane zinc metallopeptidase putative 
Protein accessionYP_003151896 
Protein GI257065640 
COG category[R] General function prediction only 
COG ID[COG2738] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0434919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAATC CATATTACTT TGGCTCAATG TATTTTGACA AGACCTATTT TTTAGTAATA 
ATAGGCGTCA TAATATCAAT GATTGCCCAG GCTAATATCC AAAAAGCCTT TAGTAAATAC
AGTAAAATCA AATCAAAAAA GAATATAACA GGCTACCAAG CGGCTAAATA TATACTCGAT
ACAAACTCAT ACAATGATAT TTCTATAAAA AAGATTGGAG GAAGCTTATC TGATTACTTC
AATCCTGCTA CAAAGGAAGT CGCCCTATCT GGGGACTCCT TTACCGATAC TTCTATAGCA
TCTATCGCTG TAGCAGCCCA CGAGTGCGGT CACGTCATCC AATACAAGGA AGGCTATGCT
CCTTTAAGGA TTAAGTCATG GTTAGTGCCT GCGGTAAACT TTGGATCAAA GCTTGCCTTT
CCAGTTATAC TTTTGGGAAT ATTCCTATCC CAACAAAAGC TTTTAGACCT GGGACTAATC
CTTTTCTCTC TTGCTCTAAT ATTTCAGTTG GTAACTCTTC CGGTGGAATT TGACGCATCG
AGGAGGGCCA TAAGGGTAAT AGACGAAAGC GGTATGCTTT ACGGCGAGGA GCTTGATGGA
GCAAAAGCCA TGCTAAAAGC GGCAGCCTTT ACCTATGTAG CAGCGACCCT ATCCACAGCC
CTACAATTGT TGAGATTATT TCTCCTTTAT GGAAACAGGA ATAACAGGAG AGATTAG
 
Protein sequence
MYNPYYFGSM YFDKTYFLVI IGVIISMIAQ ANIQKAFSKY SKIKSKKNIT GYQAAKYILD 
TNSYNDISIK KIGGSLSDYF NPATKEVALS GDSFTDTSIA SIAVAAHECG HVIQYKEGYA
PLRIKSWLVP AVNFGSKLAF PVILLGIFLS QQKLLDLGLI LFSLALIFQL VTLPVEFDAS
RRAIRVIDES GMLYGEELDG AKAMLKAAAF TYVAATLSTA LQLLRLFLLY GNRNNRRD