Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0123 |
Symbol | |
ID | 8396874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 146064 |
End bp | 146780 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644994461 |
Product | peptidase membrane zinc metallopeptidase putative |
Protein accession | YP_003151896 |
Protein GI | 257065640 |
COG category | [R] General function prediction only |
COG ID | [COG2738] Predicted Zn-dependent protease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0434919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACAATC CATATTACTT TGGCTCAATG TATTTTGACA AGACCTATTT TTTAGTAATA ATAGGCGTCA TAATATCAAT GATTGCCCAG GCTAATATCC AAAAAGCCTT TAGTAAATAC AGTAAAATCA AATCAAAAAA GAATATAACA GGCTACCAAG CGGCTAAATA TATACTCGAT ACAAACTCAT ACAATGATAT TTCTATAAAA AAGATTGGAG GAAGCTTATC TGATTACTTC AATCCTGCTA CAAAGGAAGT CGCCCTATCT GGGGACTCCT TTACCGATAC TTCTATAGCA TCTATCGCTG TAGCAGCCCA CGAGTGCGGT CACGTCATCC AATACAAGGA AGGCTATGCT CCTTTAAGGA TTAAGTCATG GTTAGTGCCT GCGGTAAACT TTGGATCAAA GCTTGCCTTT CCAGTTATAC TTTTGGGAAT ATTCCTATCC CAACAAAAGC TTTTAGACCT GGGACTAATC CTTTTCTCTC TTGCTCTAAT ATTTCAGTTG GTAACTCTTC CGGTGGAATT TGACGCATCG AGGAGGGCCA TAAGGGTAAT AGACGAAAGC GGTATGCTTT ACGGCGAGGA GCTTGATGGA GCAAAAGCCA TGCTAAAAGC GGCAGCCTTT ACCTATGTAG CAGCGACCCT ATCCACAGCC CTACAATTGT TGAGATTATT TCTCCTTTAT GGAAACAGGA ATAACAGGAG AGATTAG
|
Protein sequence | MYNPYYFGSM YFDKTYFLVI IGVIISMIAQ ANIQKAFSKY SKIKSKKNIT GYQAAKYILD TNSYNDISIK KIGGSLSDYF NPATKEVALS GDSFTDTSIA SIAVAAHECG HVIQYKEGYA PLRIKSWLVP AVNFGSKLAF PVILLGIFLS QQKLLDLGLI LFSLALIFQL VTLPVEFDAS RRAIRVIDES GMLYGEELDG AKAMLKAAAF TYVAATLSTA LQLLRLFLLY GNRNNRRD
|
| |