Gene Apre_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0114 
Symbol 
ID8396865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp136914 
End bp137987 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content38% 
IMG OID644994452 
Productpoly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 
Protein accessionYP_003151887 
Protein GI257065631 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01836] poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.292099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGGTG ATTTCAATTT TTTCGATATT AAAACAAGCA TACAAGAAAA TATTAAGGCC 
CAAGAGAAAT TCCTTAAAAG CTTTGAGTCT ATGATGGATG TAAAGGAAAA TCAAGCAAAT 
CAAACAGCTA GAGAAATCGT TTTCGAAGAA GATAAATTAA AGCTCTTCCA CTACAAGAAA 
TCAGCTGCCT ATGTGAGCAA GGTTCCAACT CTGATAATAT ATGCCTTGGT AAATACACCA 
TCTATGATGG ATATCGGTCA GGAGAAATCC TTCATCAAAA AACTTGTTGA TAGCGGACTA 
GATGTATATC TAATCGAATG GGGTTTTCCT ACTCAGGAAG ATAAGTACCT GACCTTGGAC 
GATTATATCA ATATTTATAT TGACGATTGT GTAGAATATA TCAAAAAGGA AAACAAGGTA 
GACAAGATAA ATCTATTGGG TGTTTGTCAG GGCGGAACAT TTAGCTTGAT GTATACAGCT 
CTTCACTCAG ACAAGATTAA AAATATCGTA ACAATGGTAA CACCTGTAGA TTTCTCTACG 
GATGATGGAC TTTTATTTAG ATGGGGTAAG TATTTAAACC CAGATAGGAT GGTTGAGGCC 
TACGGAGTAG TTCCAGGCGA GTTTATGAAT ACAGGATTTC TAACTCTAAA ACCAATTTCG 
CTCATGGTTA ATAAGTATGT TGATGTAATC AATGACCTGG ATGAGCCAGA CCACCTATCA 
AACTTTATGA CTATGGAAAA ATGGATATTC GACTCTCCAG GTCAAGCAGG TATGGCCTAC 
AAGGACTTCC TAAACTCAAT GTATAAGGAA AATAAACTAT GCAAGGGCGA GATGGAAGTT 
GCTGGCAAGA AGGTAGATCT TAAAAAGATT ACCCAACCTG TCCTAAATCT CTATGCAGAA 
AAAGACAATC AAGTTCCTAA CCAGGCAACA ATTCCTATGA AAGATCTTGT AGGGAGCAAG 
GATTACACAG CAAAGGGCTT TCCAACAGGC CACATAGGAA TGTTTGTAAG CGGTAGGAGC 
CAAAGAGAAG TTGCTCCAAC TGTTGTAGAA TGGTTAAAGA AACGCTCTAG ATGA
 
Protein sequence
MYGDFNFFDI KTSIQENIKA QEKFLKSFES MMDVKENQAN QTAREIVFEE DKLKLFHYKK 
SAAYVSKVPT LIIYALVNTP SMMDIGQEKS FIKKLVDSGL DVYLIEWGFP TQEDKYLTLD 
DYINIYIDDC VEYIKKENKV DKINLLGVCQ GGTFSLMYTA LHSDKIKNIV TMVTPVDFST 
DDGLLFRWGK YLNPDRMVEA YGVVPGEFMN TGFLTLKPIS LMVNKYVDVI NDLDEPDHLS 
NFMTMEKWIF DSPGQAGMAY KDFLNSMYKE NKLCKGEMEV AGKKVDLKKI TQPVLNLYAE 
KDNQVPNQAT IPMKDLVGSK DYTAKGFPTG HIGMFVSGRS QREVAPTVVE WLKKRSR