| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0092 |
|---|
| Symbol | |
|---|
| ID | 8396843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 112770 |
|---|
| End bp | 114188 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644994431 |
|---|
| Product | fumarate lyase |
|---|
| Protein accession | YP_003151866 |
|---|
| Protein GI | 257065610 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1027] Aspartate ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATT TTAGGATTGA AAGTGACTCA TTAGGAGAAA TTAAGATAGA CAAAGAGGCT
TATTACGGAG CTAATTCTAA GAGGGCTTTG GACAACTTCC CTATAACAAG AAGACCTATG
GATCCGTTTT TGGTAAGGGC CATAGTGGAG GTTAAGAAGG CTTGTGCTAT TGAAAACAAC
AAGGTAGGGA TCCTTTCTGA TAGGAAGAAG GACGCTATAG TTTCTGCCTG CGAGAAAGTT
TTGGCAGGAG AGTTTTTGGA TAATTTTGTA GTAGATCCGA TCCAAGGGGG AGCCGGCACT
TCCTTTAATA TGAATGTAAA TGAGGTCATA GCCAATATCG CCAATGAAAT TATGGGAGGG
GGAATAGGAA CTTATGAGTT TATCCATCCC AACGACCATG TAAACAAGGG TCAATCTACC
AATGATGTAA TTCCTTCTGC AGGAAAGATT GCCCTTATAA GATATATAGA AGAGCTTAAG
GAAGAAGTTA ATAATTTGAT TAAGTCTTTG GAAAACAAGG CTTGTGAGTT TGATTCATAT
ATCAAGATGG GTAGGACCCA GCTACAAGAT GCTGTGCCAA TAACCTTAGG CCAAGAGTTT
AGGGCCTATG CTAGGGCTAT CAGGAGAGAT TATGAGAGAC TGGGAGCAGC CATTCGCCAA
CTTTCATATC TAAACTTGGG AGGAACTGCT ATTGGAACTG GACTTAATGC TGATGACTCT
TACATAAAAG AAGTCGTGCC AAGCTTAGCT AAGATTTGTG ACATAGACCT TTACCAAGCA
GAAGATTTGG TAGATGCAAC ACAAAACCTC GATTGTTTCT TGTTTACTTC ATCAGTCCTT
AAGGCCCTTG CTAGTAATCT TTCAAAGATT TCTAACGATC TAAGACTCTT ATCTTCAGGA
CCAACAACAG GAATTAGCGA TTACAATCTT CCAGCCAAAC AAGCTGGTTC ATCAATCATG
CCAGGTAAGG TAAATCCAGT TATACCAGAG GTTGTAAACC AGGTTGCCTT TTTGGTTATC
GGCAATGACA TGACTGTAAC TATGGCTGTC GAGGGAGGAC AGCTCGAGCT TAATGCCTTC
GAGCCAATAA TATTTTATAG CTTGTTTGAA TCACTTAAGA CCTTAAAGGC AGCGATCCAC
ACCCTCTATA CAAATTGTAT TGACGGAATT ACATCTGATA AGAAAAAGCT AGAGAAGAGA
GTAGAAAATT CTGTCGCAAT TATAACTCCT TTCGCCCCAC ATATAGGATA TGATAGGGCA
AGTAAGGTAG CTAAGGAATC CTTGAGGACC GGAGTTTCTG TAAGGGAGAT CTTAATCAGG
GATAAGATTA TGACAAGCGA TGAGATAGAC AAGATTTTGG ATTATGAGAA CATGACCAAG
CCAGGAATCT TGGACGAAGA TCATATAAGT AAGGATTAG
|
|---|
| Protein sequence | MQNFRIESDS LGEIKIDKEA YYGANSKRAL DNFPITRRPM DPFLVRAIVE VKKACAIENN
KVGILSDRKK DAIVSACEKV LAGEFLDNFV VDPIQGGAGT SFNMNVNEVI ANIANEIMGG
GIGTYEFIHP NDHVNKGQST NDVIPSAGKI ALIRYIEELK EEVNNLIKSL ENKACEFDSY
IKMGRTQLQD AVPITLGQEF RAYARAIRRD YERLGAAIRQ LSYLNLGGTA IGTGLNADDS
YIKEVVPSLA KICDIDLYQA EDLVDATQNL DCFLFTSSVL KALASNLSKI SNDLRLLSSG
PTTGISDYNL PAKQAGSSIM PGKVNPVIPE VVNQVAFLVI GNDMTVTMAV EGGQLELNAF
EPIIFYSLFE SLKTLKAAIH TLYTNCIDGI TSDKKKLEKR VENSVAIITP FAPHIGYDRA
SKVAKESLRT GVSVREILIR DKIMTSDEID KILDYENMTK PGILDEDHIS KD
|
|---|
| |