| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0087 |
|---|
| Symbol | |
|---|
| ID | 8396838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 107793 |
|---|
| End bp | 108902 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644994426 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003151861 |
|---|
| Protein GI | 257065605 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00115186 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA AGAAATCCTA CGACTCTATA GTAACAAGGC TAATAATTTC CATTGTAATT
ATATTTGTCC TAATGGTTCT CGTTTCGAAT TTTCTTATAA ATAGGAAACA AATTATGATA
ATGGAGGAGG TCTTTGAGGG CTTTTCTAGA AACTTTCCAG AAAATAACGA GTCGGTAGTC
CTTCTTATAG ATAGTGCCCA GGTCCAATCC ACAAGTGCTT TTAGGCTGTA TCTCGGCTTG
GTTGTAGCTT CAGTCGTTCT GATTGGATCT TTGACCTTTG TCTTTATAAT CAAAAGGACC
CTAAAACCCC TAAACAAACT AGAAGAGAAG ATAGGAAGGG TGGATATAGA AAATCCCGAT
AGTTTCTCGG AAAATCTAGT CTTGGTTGAG GGGCCTACGG AGATCAAGGA GCTTTCCAAG
AAGTTTGATG ATTTAATCCA AAGGATTTAT AAGGATTACA AGAAGCAAAA GGAATTCTCA
TCAAATGTGG CCCATGAGCT AAGGACACCC ATAGCTATAA TGCAGGCCCA GGTCGATGTT
TTTAGAGAGA AGAATACTGA CGAAAATAAT CTAGACTTTA TTGAAACAAT GGATTCCAAT
CTTAAGAGGC TCAAAAATCT TATCGATTCG GTCCTTCTTT TAAGTAAGAG AAATAAATTA
AAGATTAGCT CTGTTAATCT TGATAATATG ATAGATGAGA TTTTGTTTGA CCTAGATGAT
TTTGCCTCTA AGAAAAATAT TAGCCTAGAC TATCACTATT CTAATATAAG CATTGATTCG
GATGATGTCC TAATCCAAAG GCTTATCTTT AATATAGTAG AAAATGCCAT CAAATATACC
GAAGAGGGAG GCTTAGTTGA TGTTAATGTG AGTCAAAATG ATAAGGAGAC TGTAATAAGA
ATATCCGATA CTGGAATTGG GATTAGTGAT GAGAAAAAGG AGGCAATATT TGATCTTTTC
TATCAAGTAG ATGACTCAAG AAACAAAGAA GGCTTTGGTA TAGGCCTTTC TCTATCTAAA
GATATAGCCG AAACTTTGGG GGCGAGGATA GAAGTAAGAG ACAATAAGCC TAAGGGAACA
ATATTTTTGA TAAAATTTAG AAATATTTAA
|
|---|
| Protein sequence | MKNKKSYDSI VTRLIISIVI IFVLMVLVSN FLINRKQIMI MEEVFEGFSR NFPENNESVV
LLIDSAQVQS TSAFRLYLGL VVASVVLIGS LTFVFIIKRT LKPLNKLEEK IGRVDIENPD
SFSENLVLVE GPTEIKELSK KFDDLIQRIY KDYKKQKEFS SNVAHELRTP IAIMQAQVDV
FREKNTDENN LDFIETMDSN LKRLKNLIDS VLLLSKRNKL KISSVNLDNM IDEILFDLDD
FASKKNISLD YHYSNISIDS DDVLIQRLIF NIVENAIKYT EEGGLVDVNV SQNDKETVIR
ISDTGIGISD EKKEAIFDLF YQVDDSRNKE GFGIGLSLSK DIAETLGARI EVRDNKPKGT
IFLIKFRNI
|
|---|
| |