| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0072 |
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| Symbol | |
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| ID | 8396823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | + |
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| Start bp | 90619 |
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| End bp | 92838 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 644994412 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003151847 |
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| Protein GI | 257065591 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.723397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAGT ATAATGAAAA ATCTAGAACA TTTTATTTAG GGAATGAGTA TGTGAGTTAT
ATCTTTAAAA TATTGGAAAA CGAACAGCTA GGACAGTTAT ACTACGGTAA AGCTATAAAA
GATTCTAAAA ACTTTGATCA CTTATTTGAA AGTGAGCCAA GACCTATGAC TGTTTGTACA
TTTGACGGAG ATATGAAGTT TTCTCTTGAA TATATAAAGC AAGAATATCC ATCATACGGT
ACAGGAGATA TGCGTCATCC AGCCATAGAT ATATTACAAG AGAATGGAAG TCGAATCATA
GACTTCAAAT ACCAAAGTCA TGAAATAATA AAAGGAAAGC CAGAATTAAA AGATCTACCA
GCTACGTATG TTGAACATGA TGATGAAGCA GAAACACTAT CAGTAAGCTT ATACGATGAT
TTAATAGATG CTAAGTTAAT ACTAACTTAT ACAATTTTTA AAGATAGACC TGTGATAACA
AGAAATGCTT ATATTGAAAA TTGTGGCGAT ACTGAGTTTA GACTTAATAG AGCTATGAGC
CTATCTTTAG ACTTGCCAGA TAAAGATTAT GATATGATTG AATTAACAGG AGCTTGGTCA
AGGGAAAGAC ATATAAAGTC TAGAAAACTA GAGCATGGAA TTCAATCAAT ATACTCGCTT
AGAGGAATAT CTAGTGCTAA TTTTAATCCT TTTATAGCAT TAAAAAGATA CGATTGTAAC
GAGAATAGCG GAGAAGTACT AGGATTTAGC TTTGTATATA GTGGTAACTT TTTGGCTCAA
GTTGAAGTTG ACACATACGA TATATCAAGA GTGAGCATGG GTATACATCC ACATAATTTT
TCATGGAAGT TAAGAAAGGG AGAATCTTTC CAAACTCCTG AAGTGGTAAT GGTATATAGC
GATAAAGGTC TTAATGGTAT GAGCCAAACA TTCCATAAAT TATATCAATC AAGACTTGCG
AGAGGAAAAT TCCGTGATGA AGCAAGACCA ATCCTCGTAA ACAATTGGGA AGGAACTTAT
TTTGATTTTG ATGAAGAAAA AATACTTAGC ATGGCAAAAC AATCTAAGGA ATTAGGAGTT
GAGTTATTTG TATTAGATGA TGGGTGGTTT GGAGTTAGAA ATGATGATAC ATCTGGATTA
GGAGATTGGT ATCCAAATCT AGATAAACTT CCAAATGGGA TATCAGGGTT ATCTAAAAAA
GTTACAGAAA TGGGAATAAA ATTTGGATTA TGGATAGAGC CAGAAATGGT TAATAAAGAT
TCAGAATTAT ACAGAAAACA TCCTGAATGG ACTTTAGAAA CACCTAATAG AAAATCAAGC
CATGGTAGAC ATCAACATGT TTTAGATTTT TCTAATCCAG ATGTTATAGA TTATATATAT
AAAATGATAT CTAAGGTAAT TAGAGAATCA GATATCTCTT ATATCAAATG GGACATGAAT
AGATCTCTTA GTGAAGTTTA TTCTAATGTA CATGATAGCG AAAGTCAAGG TAAAGTAATG
CACAAGTATG TTTTAGGAGT GTATAGATTG TATGAAATGC TCATAAATGA ATTCCCAGAC
ATACTATTTG AATCATGTTC GAGTGGAGGA TCAAGATTTG ATCCAGGAAT GTTATATTAT
GCTCCACAAT GTTGGACAAG TGATGATACT GATGCTATAG AAAGACTTAA AATTCAGTAC
GGAACATCCC TAGTTTATCC ATTATCATCA ATAGGCGCTC ACGTATCCGC TATACCAAAT
GCCCAAGTTT TCAGAAATGT ACCTATAGAA ACAAGGGCTA ATGTTGCTTG CTTTGGAACT
TTCGGATATG AACTTGACGT AAACAAGTTG AGCGAAGAAG ATAAAAAAGT AATAGTTGAG
CAAATAAAAT TTATGAAAGA TAATAGGAAG CTTTTACAGT TTGGAACTTT CTATAGACTA
AAGAGCCCGT TTGAAGGTAA TGAGACTGTA TGGATGGTTG TATCCGAAGA CAAAGATAAG
GCTATCGTAG GTTATTACAA AACACTACAA AAGGTAAATT GCCCATATAA TAGGGTAAAA
CTTCAAGGAT TAGATCCAGA AAAGAAGTAT GAAGTATCAA TCAATGATTA TGAAGCGTAT
GGCGATGAAT TAATGAATGT AGGAATGATA ACTACTGATA GATCGTCTGG AGAGCAAAAA
GATATAAATA AGGCCGAAGG AGACTATTCT TCAAGACTTT ATATACTTAC AGCAAAATAA
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| Protein sequence | MIKYNEKSRT FYLGNEYVSY IFKILENEQL GQLYYGKAIK DSKNFDHLFE SEPRPMTVCT
FDGDMKFSLE YIKQEYPSYG TGDMRHPAID ILQENGSRII DFKYQSHEII KGKPELKDLP
ATYVEHDDEA ETLSVSLYDD LIDAKLILTY TIFKDRPVIT RNAYIENCGD TEFRLNRAMS
LSLDLPDKDY DMIELTGAWS RERHIKSRKL EHGIQSIYSL RGISSANFNP FIALKRYDCN
ENSGEVLGFS FVYSGNFLAQ VEVDTYDISR VSMGIHPHNF SWKLRKGESF QTPEVVMVYS
DKGLNGMSQT FHKLYQSRLA RGKFRDEARP ILVNNWEGTY FDFDEEKILS MAKQSKELGV
ELFVLDDGWF GVRNDDTSGL GDWYPNLDKL PNGISGLSKK VTEMGIKFGL WIEPEMVNKD
SELYRKHPEW TLETPNRKSS HGRHQHVLDF SNPDVIDYIY KMISKVIRES DISYIKWDMN
RSLSEVYSNV HDSESQGKVM HKYVLGVYRL YEMLINEFPD ILFESCSSGG SRFDPGMLYY
APQCWTSDDT DAIERLKIQY GTSLVYPLSS IGAHVSAIPN AQVFRNVPIE TRANVACFGT
FGYELDVNKL SEEDKKVIVE QIKFMKDNRK LLQFGTFYRL KSPFEGNETV WMVVSEDKDK
AIVGYYKTLQ KVNCPYNRVK LQGLDPEKKY EVSINDYEAY GDELMNVGMI TTDRSSGEQK
DINKAEGDYS SRLYILTAK
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