Gene Apre_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0065 
Symbol 
ID8396812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp78024 
End bp78572 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content32% 
IMG OID644994402 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_003151841 
Protein GI257065585 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.73098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAA TAGAATATTT AGTAAAAGAA CACGATCAGA TAACAAAGTT TTTGGATAGG 
TTAGAGGAAG AATGCCTTTC TATTCTTAAG GATAAAACTA TAGATGAAGA ATTCTTCAGG 
GCAAGCATCT CCTTTATTAG AGAGTTCGCA GATGGAATCC ATCACAAGAA GGAAGAAGAT 
ATCCTTTTTA AATATATGCT AGAAGAGCTA GGAGTTTTAG GAGAAAAAGT TATAAAAAAC 
GGTATGCTAG TCGAGCATCA ACTTGCTAGA TCCTATGTAT TTAAGCTTGA AAACTCACTA 
AATTCTTATA AGAGAACAAA AGATGATAGA GATATCCTCC AAATTATCGC AAACTCTATG 
GCCTATGTAA ATCTTTTAAG AGAGCATATA GATAAGGAGA ATTCTACGGT ATATACTTTC 
GCAGAAGATA GATTAAAAGA TGATATCAAA GAAAAAATCG AGAAAGAAAG TGATAATAGA 
CTAAAGGAAG ACGAGCTATC CTATCAAAGG AAGGAAGAAC TTCTTAACAT TATTTTCAAA 
AATTTATAA
 
Protein sequence
MKAIEYLVKE HDQITKFLDR LEEECLSILK DKTIDEEFFR ASISFIREFA DGIHHKKEED 
ILFKYMLEEL GVLGEKVIKN GMLVEHQLAR SYVFKLENSL NSYKRTKDDR DILQIIANSM 
AYVNLLREHI DKENSTVYTF AEDRLKDDIK EKIEKESDNR LKEDELSYQR KEELLNIIFK 
NL