Gene Apre_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0046 
Symbol 
ID8396793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp55273 
End bp56490 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content37% 
IMG OID644994383 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003151822 
Protein GI257065566 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAA ACAAAGATTT CTATGTCCTG CTTATAGGAC GACTTATCAC AAACTTTGGC 
GATAGCCTTT ATGCTATAGC TTCAACCCTC TTGGTCTACC AGATGAGTGG GTCCACTGTC
TATTCAGGTA TAAGTCTATT TCTAACCTCA TCAACCGCCA TTGTTCAATT ACTTCTAAGT
CCAATCTTGG ATAAGATTAA TATGAAGAAG TTTTTGATTC TTACCCAATT TCTACAAGCT
ATATTAATAT TAATAATTCC TGCCTTGTAT TATTTGGAAA AATTAAATGT TTACCACATA
ATGGTTCTTA TGCCAATAAT TTCCTTGCTT AACCAGCTGG TTTATCCTGG ACAGATTTCT
CTTCTGCCTA AGATCCTTTC CGAAGAAGAG CTTGTTACAG GAAATTCCTT GATGACTATG
GCGTATCAAG GGTCAAATGC CATCTTTGAT ACCCTATCAG GTTTTATTAT AGCGATTTTT
GGCTTTATGA CTGCTTTTTA TGCAGACAGT GTGAGTTTTA TCTTGACTGG CCTTTTGTTT
TGTATCTTAT CTAAAAAGCT TAGTCATTAC AATGAAAGAG AAAATCAAAG TGGGGATTCT
GCTATTAAAA ACCACTTTAA GGGACTTAAA GAAGGTCTAG GTTTATTCAA GGATTCTAGG
ATTTTTGCCC TAGTCCTTGG AGTAGTCTTT ATAAATTTCT CTGCCACATC TATAAGTGCA
GTCTTACCTG CCTTTGCCAA AGATGAAATC TTCTATAGTC TCATGCTTGC AGGCATGGGA
GCAGGAGTCC TCCTTGGTTC TTTGTTTGCA GGTCTTCCAA AGCTAAAGGA AGTATCTTTA
GGAAAGCTTT ATGTTTATGG AATGCTCATA GTTTCCTTAG CCTGGATATC TCTTTCTTAC
TTTGCTGCAA ATATTAAGCT TGCAGTCGCC TTGTACGCTC TTGGTTGGTT TGTAGTAGGA
ATAGTTAATG TCTATGCCCA AACCATGATT CAGATGCTTG TCCCAAGTGA GAAGATTGGA
TCTGCCATGG GGGCTATGGT AGGTATTTCT ACCTTTATGG CACCTGTCGG AGCCTTAGTC
GGTGGATTTC TAGGAGAGTA TTTATCAAGT TCAAAAGCGA TTCTTATAGG AAGTGCCATA
ATTCTTTTGG TTGCTATCTA CTGGGCTTTG AATAAAAATA TTAGGAAGCT TCCAGCCGTA
AATTATTTTG TAAAATAA
 
Protein sequence
MIKNKDFYVL LIGRLITNFG DSLYAIASTL LVYQMSGSTV YSGISLFLTS STAIVQLLLS 
PILDKINMKK FLILTQFLQA ILILIIPALY YLEKLNVYHI MVLMPIISLL NQLVYPGQIS
LLPKILSEEE LVTGNSLMTM AYQGSNAIFD TLSGFIIAIF GFMTAFYADS VSFILTGLLF
CILSKKLSHY NERENQSGDS AIKNHFKGLK EGLGLFKDSR IFALVLGVVF INFSATSISA
VLPAFAKDEI FYSLMLAGMG AGVLLGSLFA GLPKLKEVSL GKLYVYGMLI VSLAWISLSY
FAANIKLAVA LYALGWFVVG IVNVYAQTMI QMLVPSEKIG SAMGAMVGIS TFMAPVGALV
GGFLGEYLSS SKAILIGSAI ILLVAIYWAL NKNIRKLPAV NYFVK