Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0038 |
Symbol | |
ID | 8396785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 46128 |
End bp | 47330 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644994375 |
Product | Na+ dependent nucleoside transporter domain protein |
Protein accession | YP_003151814 |
Protein GI | 257065558 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000907116 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGA TCTTGAACCT TCTGGGTATA GTTATTGTAA TAGGATTTAT GTTTTTAATA TCTATGAACA GGAAGGCTGT AAAAGTTAAG GGGATTTTCA CAGCTCTTTT AGCTCAATTT ATAATAGCAG GCCTTCTTGT GAAACTCCCT CAAGGAAGAG CGGCTATAGG AGCTGTTAGT AAGGCTGTAG AAAAGGTTTT ATCCTATGGT AGCGAGGGAA TCCAATTTGT TTTTGGATCT TTGGGAGATC CAGCAGCTGC ATCAGGATAT ATATTTGCCT TTCAAACCTT GACCAATATT ATATTTATAT CATCTTTAGT TGCAGTCTTG TTCTATACTG GAATTTTGGG TTTTGTAGTA TCAAAGATAG GTTGGCTCAT AGGAAAATTA TTTAAAACAT CAGAGGTTGA GTCCTTTGTA GCAGTTGCTA ATATGTTCTT AGGTCAAACT GACTCACCAA TCCTTGTAGC AAAATATTTA AACTTCATGA CAGAAAGTGA AGTAATGCTA GTCCTCGTTT CAGGAATGGG ATCAATGTCA GTATCAATTA TTGCAGGCTA TGTTGCCTTG GGAATCCCTA TGGAATCCTT GCTTATAGCA TCTACCATGG TTCCAGTTGG CTCAATCCTT CTATCCAAAA TTGTATGCCC ACAAACAGAG GAAATCCAAG AGCTCGGTGA AGTGAAGATG GACAGGAAGG GCAACAACGA AAACGTCCTA GATGCCTTGG CAAGTGGAGC CCTCGATGGA ATGAATATGG CTATGGCAAT AGGAGCAAGC CTTATAGCTA TAATTTCTAT AGTAGCTTTG ATAAATGGGA TTTTGGGCAT ATTTAATATT TCTTTGGAGA CTATCCTATC TTATGTATTT GCACCAATGG GTTACTTGAT GGGACTTGAA GGTAAGGAAG TCTTTACAGC AGGTGAGCTT TTAGGTTCAA AATTAATCTT AAACGAATTC GTAGCCTTTG GCAAGCTTGG TCCAATGCTT GCTACTATGA GCGAGAGAAC AGGTCTTATG CTTGCAGTAT CTCTTGCAGG ATTTGCTAAT GTAAGCTCAA TAGGAATTTG TATATCTGGT ATATCAGTCC TATGTCCAGA AAAAAGACCT GTTCTTGCAA AGCTTGCCCT AAGGGCTATG ATTGCGGGAT TCTGTGTCAG CGTACTATCA GCTTTAATAG TTGGTATTTG GTTATTATTC TAA
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Protein sequence | MKLILNLLGI VIVIGFMFLI SMNRKAVKVK GIFTALLAQF IIAGLLVKLP QGRAAIGAVS KAVEKVLSYG SEGIQFVFGS LGDPAAASGY IFAFQTLTNI IFISSLVAVL FYTGILGFVV SKIGWLIGKL FKTSEVESFV AVANMFLGQT DSPILVAKYL NFMTESEVML VLVSGMGSMS VSIIAGYVAL GIPMESLLIA STMVPVGSIL LSKIVCPQTE EIQELGEVKM DRKGNNENVL DALASGALDG MNMAMAIGAS LIAIISIVAL INGILGIFNI SLETILSYVF APMGYLMGLE GKEVFTAGEL LGSKLILNEF VAFGKLGPML ATMSERTGLM LAVSLAGFAN VSSIGICISG ISVLCPEKRP VLAKLALRAM IAGFCVSVLS ALIVGIWLLF
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