Gene Apre_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0036 
Symbol 
ID8396783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp44266 
End bp44934 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content37% 
IMG OID644994373 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_003151812 
Protein GI257065556 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000477173 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA AAGAAATCTA CGCTCACATA GACCACACCC TATTGAAGGC TTTTGCTAAA 
TGGGAAGATA TAGAAAAGCT CTGTGATGAG GCAGTAAAAT ATCAAACGGC TTCAGTTTGT 
ATCCCACAAA CATATATAAA AAGAGTTAAG GAAAAATATG GTGATAAACT AACAATTTGT 
ACAGTAATCG GCTTCCCTCT AGGATATAAT CTAACAGAAT CAAAGATAGT AGAAGCAGAA 
CAATCCCTTG CCAATGGTGC AAGTGAGATA GATATGGTTG TAAATATCTC AGATGTTAAA 
AATGGAGACT ACGAGAAGGT AGAAAAGGAG ATAAGAGCTA TCAAGGAAGC TATAGGAGAT 
AAAATCCTTA AGGTGATTAT CGAAACTTGC TATCTTACAG AGGAAGAAAA AATAGCTATG 
TGTGAAGCTG TTACCAAGGC AGGAGCTGAT TACATCAAGA CATCTACAGG CTTTGGTACA 
GATGGGGCTA GGATGGAAGA TGTAATCCTA TTTAAAGACC ACATTGGAGA AAATGTTAAA 
ATAAAAGCAG CTGGTGGAGT TAAAACAAAA GAAGACCTAG TAGCCTTTAT AGAAGCAGGT 
TGCGACAGGA TAGGAACAAG CTCAGCTATA AAGATGCTTA AGGGCGAAGA AAATAAGTCA 
GATTATTAG
 
Protein sequence
MENKEIYAHI DHTLLKAFAK WEDIEKLCDE AVKYQTASVC IPQTYIKRVK EKYGDKLTIC 
TVIGFPLGYN LTESKIVEAE QSLANGASEI DMVVNISDVK NGDYEKVEKE IRAIKEAIGD 
KILKVIIETC YLTEEEKIAM CEAVTKAGAD YIKTSTGFGT DGARMEDVIL FKDHIGENVK 
IKAAGGVKTK EDLVAFIEAG CDRIGTSSAI KMLKGEENKS DY