Gene Apre_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0028 
Symbol 
ID8396775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp33687 
End bp35099 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content37% 
IMG OID644994365 
Productamino acid carrier protein 
Protein accessionYP_003151804 
Protein GI257065548 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGAAA TTATAAAATC GTTTACGGAA TGGTTATGGG GATGGCCACT GCTTGCCCTA 
GTTATGGGTG GTGGGCTAAT TATTAATATT AGAACTGGCT TTATTCAACT AAGATATTTC
CCATATATCA TGAGACAAAC TTTTGGAAAG ATGTTTTCTA AAAATGCAGA AGGATCTGGT
ACAGTTTCAG CCTTCCAAGC TATGACAACG GCCCTTGCTT CATCCATAGG AGCAGCTAAT
ATAGTGGTAG TGCCAACGAT TATATTTGCT GCAGGCCCTG GGGCTATATT TTGGATGTGG
ATGGCTGCAA TAATAGGTCA GGGAACAAAG TTTGCAGAAG TCGCCCTATC CATCAAATAT
AGACAGAAGA ACGAAGATGG AGACTTCGTA GGAGGATGCT CTTACATGTT AAAGAACGGA
CTAAAGGGTG GTCTGGGCAA GGCTATGGGA GCTTTGGCAG CCTTCTTCTT TATGATTGAG
ATCCTTCCAT CAATTACTCT TCAAACTCTA TCAGCAGCAG GTCCTGTTGA AAATGTGTTT
GCTGCAACTA GTCTAAACGA GAACATTATC AAAATAATTG CTATTATAGT TATTTTTATA
ATTGTTTCAA TTGTAGTCTT TGGTGGAGTA AAGCAAATTG GTAGAGTTAC AGAAAAACTA
GTTCCAATAA TGGCAGCTAT ATATATACTT TTTGGTATAA TCATAATCAT TATGCACATA
GGTGACGTGC CAAGAGTTCT TGGATATATT ATAAAAGGTG CCTTCAATCC AAAAGCAGTT
GCTGGTGGAG TTGGTGGGGC AACTTTATCT AAAGTAATCT CAATGGGTGT TGCTCGTGGT
GTTTATTCTA ATGAAGCTGG TATGGGTTCT GCAGGATATG GTCATGCAGC GGCAACCACA
GATCATCCAG CTAGACAAGG TATGTGGGGA GTGTTTGAAG TATTTGCAGA TACAATTGTG
GTTTGTACAA TATCAGCACT CACAGTTCTT TTATCAGGAG TATGGCAACC AGGTTTAAGT
CAAGCAGAAA GCGATAAATT AGCACCTGTA GCAGTTGAAA GAGCATTCAA TACAATATTT
GGTCAAGCAG GATCAATAGT AATATCCATA AGCTTATTCC TCTTTGTACT ATCAACAATC
ATAGTAATAG TATTCTACTG CGAAAAACAA GCTGAATATC TATTTGGTAC CAAAGTTGGT
AAGATAATGA GAGTTGTAGC ATCACTTATG ATTCTTCTTG GAATATTTGT ATCTTTCGAA
AAGGCTGGAG TATTCTTAGA CTTTACATTA GGACTTGTAG TAATACCTAA TATGATAGGA
CTTATAGCTA TGAGCGGAGA GATAAAAGAT ATTAAGAAAG AATTCTTTAA TGGAGAGAAT
TATTATAAGC TAGATCAAAA AAATAAGAAA TAA
 
Protein sequence
MLEIIKSFTE WLWGWPLLAL VMGGGLIINI RTGFIQLRYF PYIMRQTFGK MFSKNAEGSG 
TVSAFQAMTT ALASSIGAAN IVVVPTIIFA AGPGAIFWMW MAAIIGQGTK FAEVALSIKY
RQKNEDGDFV GGCSYMLKNG LKGGLGKAMG ALAAFFFMIE ILPSITLQTL SAAGPVENVF
AATSLNENII KIIAIIVIFI IVSIVVFGGV KQIGRVTEKL VPIMAAIYIL FGIIIIIMHI
GDVPRVLGYI IKGAFNPKAV AGGVGGATLS KVISMGVARG VYSNEAGMGS AGYGHAAATT
DHPARQGMWG VFEVFADTIV VCTISALTVL LSGVWQPGLS QAESDKLAPV AVERAFNTIF
GQAGSIVISI SLFLFVLSTI IVIVFYCEKQ AEYLFGTKVG KIMRVVASLM ILLGIFVSFE
KAGVFLDFTL GLVVIPNMIG LIAMSGEIKD IKKEFFNGEN YYKLDQKNKK