Gene Apre_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0006 
Symbol 
ID8396753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp6175 
End bp8619 
Gene Length2445 bp 
Protein Length814 aa 
Translation table11 
GC content39% 
IMG OID644994343 
ProductDNA gyrase, A subunit 
Protein accessionYP_003151782 
Protein GI257065526 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0624353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAG ATAACAATAT TATTAATGTA GACCTAGAAA AGAAGATGAA GGACTCCTAT 
CTCGAATACT CCATGAGTGT AATCGTATCT AGGGCCCTTC CAGATGTAAG AGATGGTCTA
AAACCAGTTC ATAGAAGAAT CCTCTACGGG ATGGAAGGCC TAGGACTTGA TCCAAATAAG
CCTACTAGGA AATCCGCTAG GGTAGTCGGT GATGTAATGG GTAAATACCA TCCTCACGGT
GATAGTGCCA TCTACGATGC CTTGGTAAGA CTTGCCCAGG ACTTCTCAAC CAGATATCCT
TTGGCCCAGG GTCAAGGTAA CTTTGGTTCA ATAGACGGAG ATGACGCAGC TGCTATGCGT
TATACAGAAG TTAGGATGAG CAAGATCGCC AAGGAGATGC TAAGAGATAT CAACAAGGAT
ACGGTCGACT TTATGCCAAA CTTCGACGAA GAGGAATTGG AACCAGTTGT CCTTCCTTCA
AGATTTCCTA ATCTTCTTGT AAATGGATCA AATGGTATAG CTGTAGGTAT GGCTACAAAT
ATGGCTCCTC ACAATCTAGG AGAGTCAATT GATGCTTGTA TAGCCTATAT GAAAGATCCT
GAAATCTCTA TTGAGGATCT AAACAAAATA ATACCAGGAC CAGACTTTCC AACAGGAGCC
TACATCCTCG GTAAAGCAGG AATAAAGGAT GCCTATAGTA CAGGACGAGG CAAGGTAAAG
CTCCGTGCTG TTTGTAAAAT CGAACCCTTC AAGAAAAATA GGGAAAGAAT AGTAATCACA
GAAATTCCTT ACCAGGTAAA CAAGTCAAGG CTAATAGAAA AGATAGCAGA CCTTGTTAAA
GATAAGAGAA TCGATGGCAT ATCTGATATT AGGGATGAGT CAGACAGAAA GGGAATGAGG
ATTGTAATAG AGATCAAAAG AGACTCTAAT GCCAATATCG TCCTCAACAA TCTCTACAAA
TATACCCAAC TTGAGACAAC ATTTGGAATA ATAAACCTAG CCCTAGTAGA TGGGGTGCCT
AAGGTTTTAA ATCTCAAGGA ATTAATCGAA TACTATATCG AACATCAAAA GGATGTAGTA
ACTAGAAGGA CAAGCTTCGA CCTATCCAAG GCTAAGGCTA GAAAACACAT TGTAGAAGGT
CTTATAATAG CAATCGATAA TATCGATGAA ATAATAAGAA TAATTAGATC TTCTTATGAT
AACGACGAGA TCAAGAAAAT ATTCTTTGAA AAATTCGGCC TTACAGATAA GCAATCTCAA
GCTATCCTCG ATATGCAACT TAAAAGACTA TCAGGACTTG AAATTGACAA GTTAAATGCT
GAAAACAAAG AGCTAGAAGA GACTATAGCA TACCTTCTTT CTATCCTAAA TTCAGAAGAA
AACCTCCTCA ATCTAATAAT CGATGAGATG GAAGAGATAA AAGAGAAATT CTCTGATGAC
AGAAGAAGCA AGATTATTCC AGATGAGGGT GAAATCGACA TAGAAGAGCT AATCGAAAAA
GAAGATGTCC TCCTTACCCT AACTAAAGAT GGCTACATCA AAAGACTCCC TATAGATACC
TACAAGGTCC AAAATAGGGG TGGCAAGGGA ATAGCAGCAG GCAATACCAA AGAGGGAGAC
TTTATCAAGA AGATAAAGAC AACCAACACC CACGAGGACC TCTTATTCTT CACCTCCTTC
GGTAAGGTCT ACTCCCTAAA GACCTACGAA GTCCCAGAAG GAAGCCGCCA ATCAAGAGGA
ATTGCAATTA TCAATATCCT AAAGCTTGAA TCTGGAGAAA AAATTACAGA AATGATGACC
CTATCCGAAC TAAACAAGGA TAGCCAAATA GTCCTTCAAA CCAAAATGGG TACAATCAAG
AAAACTGATG CCGAAAACTT CACAAATATT AGGAAAAATG GAATCATAGC CATCTCCCTC
AAAGAATACG ATAGGCTAAT CTCAGTTAGA CAAATAGATA AGGAAGAAGA GTTAATCATA
TCAACTAAAA ATGGTATGAC CATCCAATTT AACTCAGCTG ACCTTAGATC TATGGGAAGA
ATCGCCCAAG GTGTAAGGGC AATCAAGCTC GACAAGGACG ATGAAGTTGT ATCTATGAAT
ATAAAAGGCG ATGAGACCTA TCTGCTTGTA GTAACAGAAA ACGCCTACGG CAAGAAGACC
TCCTTTAACA ATTTCAAAAA TCAAAATAGG GGTGGCAAGG GTGTCAAATG CCACAAGGTT
ACAGAAAAAA CAGGAAAAAT CATAGATACT TTACCAGTAG ACCTAGATAA TGATATAATG
ATGGTATCCC TATCAGGTGA TATGATAAGA TTAAATGTAA GGGACATATC TATAACAGGC
AGAAACACAG TAGGTGTCAA GCTTAAAAAC CTTACAGATG AAAATGACAG GATTGTTTCA
GTAACTAAAT ATAGCACTTT GGAAGAAGAG GAAGAAGATG TTTAA
 
Protein sequence
MIEDNNIINV DLEKKMKDSY LEYSMSVIVS RALPDVRDGL KPVHRRILYG MEGLGLDPNK 
PTRKSARVVG DVMGKYHPHG DSAIYDALVR LAQDFSTRYP LAQGQGNFGS IDGDDAAAMR
YTEVRMSKIA KEMLRDINKD TVDFMPNFDE EELEPVVLPS RFPNLLVNGS NGIAVGMATN
MAPHNLGESI DACIAYMKDP EISIEDLNKI IPGPDFPTGA YILGKAGIKD AYSTGRGKVK
LRAVCKIEPF KKNRERIVIT EIPYQVNKSR LIEKIADLVK DKRIDGISDI RDESDRKGMR
IVIEIKRDSN ANIVLNNLYK YTQLETTFGI INLALVDGVP KVLNLKELIE YYIEHQKDVV
TRRTSFDLSK AKARKHIVEG LIIAIDNIDE IIRIIRSSYD NDEIKKIFFE KFGLTDKQSQ
AILDMQLKRL SGLEIDKLNA ENKELEETIA YLLSILNSEE NLLNLIIDEM EEIKEKFSDD
RRSKIIPDEG EIDIEELIEK EDVLLTLTKD GYIKRLPIDT YKVQNRGGKG IAAGNTKEGD
FIKKIKTTNT HEDLLFFTSF GKVYSLKTYE VPEGSRQSRG IAIINILKLE SGEKITEMMT
LSELNKDSQI VLQTKMGTIK KTDAENFTNI RKNGIIAISL KEYDRLISVR QIDKEEELII
STKNGMTIQF NSADLRSMGR IAQGVRAIKL DKDDEVVSMN IKGDETYLLV VTENAYGKKT
SFNNFKNQNR GGKGVKCHKV TEKTGKIIDT LPVDLDNDIM MVSLSGDMIR LNVRDISITG
RNTVGVKLKN LTDENDRIVS VTKYSTLEEE EEDV