Gene Apre_0005 details

Gene Information

• Locus tag: Apre_0005
• ID: 8396752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013171
• Strand: +
• Start bp: 4265
• End bp: 6166
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 644994342
• Product: DNA gyrase, B subunit
• Protein accession: YP_003151781
• Protein GI: 257065525
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGATA ACAATTATGA TGCTGGCAAT ATCAGGGTCT TGGAAGGACT AGAACCAGTT 
AGACTAAGAC CGGGTATGTA TATAGGTTCG ACCAGCGAAA AGGGACTTCA CCACTTAGTT 
TACGAAGTCG TTGACAACTC TGTAGATGAA GCCTTGGCAG GTCGTTGCGA CTACATAAAA 
GTAACAGTAA CAAAAGATAA TGTAATAAAA GTCGAGGATG ACGGTTCAGG AATTCCAGTA 
AAAGAGCACC CTACAACTCA CAAATCGACC CTTGAGACAG TCCTTACAGT ATTGCACGCT 
GGTGGTAAGT TTGACGACTC TGCCTATCAG TTTTCGGGAG GACTTCACGG TGTAGGTGTC 
TCTGTAGTAA ACGCCCTAAG TGAATACCTA ATAGCAGAGG TCAAAAGAGA TGGTCACATT 
TACAAGATGA CTTTTGCCAA GGGAGAAGTC ACCAGCGATT TGGAAATTAT TGGAGATACG 
GATGAGACCG GTACAACTAT AACATTTAAG CCAGATGGAG AGATTTTCGA TACAACAATA 
TTTGATAGGA AAACTTTAGA AAATAGGTTC AGGGAAATGG CCTTCCTCAA TAAGGGAGTA 
GAAATAATCC TTGAAGATGA GAGAGATGAC TTTTCCGAAA GCTTCAAATA TGAGGGTGGA 
ATCAAGGAAT TTGTAACATA TCTTAATAGA AATAAGACTC CAATTATGGA GCAAGTTCCT 
CACTTCGATG GCATGCAAGA AGATATAGAA GTAGAAGTAA GCTTCCAATA TACAGATGGT 
TACAGCGAAA ATATCCTAAC CTATGCCAAC AATATCCACA CACCAGAAGG CGGAACCCAC 
CTATCAGGCT TTAGGTCAGC CCTTACAAGA ACAGTAAATG ATTACGCTAG AAACTTTAAG 
TTCCTAAAAG AAAATGACGA AAACCTTCAA GGTGACGACA TAAGAGAAGG AATTACTGCT 
GTAGTTTCTA TCAAAATATC AGACCCACAA TTTGAAGGAC AAACCAAGGC TAAACTTGGA 
AACTCAGAGG TTAGAGGAGC GGTAGATACC TTCGTTAGCC AGAGACTTCA AGCTTATCTA 
GAAGAAAATC CAAAGCCTGC CAAAAATATA ATAGAAAAGG CCCTAGCATC CAGAAGAGCA 
AGGGAGGCTG CAAGAAAGGC AAGAGACTTA ACTAGGAAAA GATCAATTCT AGATTCTACA 
ACTCTTCCAG GAAAACTTGC GGATTGCCAA TCAACCGATC TTTCCGAAAA TGAAATTTTC 
ATAGTCGAGG GTAATTCTGC GGGAGGATCT GCTAAGGGTG GAAGAGATAA CAGGATTCAA 
GCCATTCTTC CCTTAAGAGG AAAAATCATG AATGTAGAAA AGGCTAATCT CGATAGAATC 
CTAAACTCAG AAGAAATTAA GGCTATGATT ACAGCCTTCG GCACAGGAAT AGGCAAGGAA 
TTTGATATAT CTAAACTCCG CTACGGCAAG ATTATAATCA TGACCGATGC CGACGTCGAT 
GGTGCCCATA TCAGAACCCT TCTTTTGACC TTCTTCTACA GGTACATGAA GCCACTAATA 
GATGAAGGCC ATGTATACGT TGCCCAACCA CCTTTATATA AGATCAGTCA CGGCAGAAAT 
GAACGCTATG TATATACAGA CGCCGAAAGA GACAAGGTCC TTAAGGAACT TAATGTAGAT 
AATTACAAAA TAAACAGATA TAAGGGTCTT GGTGAGATGA ATGCAGATCA ACTATGGGAT 
ACTACAATGG ATCCAGATCA CAGGGTTCTT CTAAGAGTAA ATGAAGACCT AGATTCAACT 
AGTACAGATG ATACTTTCTC ACTTCTAATG GGAGAGAAGG TAGAACCAAG ACGTAACTTT 
ATCCAAGAAA ACGCCAAGTA CGTATCAAAT ATTGACGTAT AG 

 

Protein sequence

MQDNNYDAGN IRVLEGLEPV RLRPGMYIGS TSEKGLHHLV YEVVDNSVDE ALAGRCDYIK 
VTVTKDNVIK VEDDGSGIPV KEHPTTHKST LETVLTVLHA GGKFDDSAYQ FSGGLHGVGV 
SVVNALSEYL IAEVKRDGHI YKMTFAKGEV TSDLEIIGDT DETGTTITFK PDGEIFDTTI 
FDRKTLENRF REMAFLNKGV EIILEDERDD FSESFKYEGG IKEFVTYLNR NKTPIMEQVP 
HFDGMQEDIE VEVSFQYTDG YSENILTYAN NIHTPEGGTH LSGFRSALTR TVNDYARNFK 
FLKENDENLQ GDDIREGITA VVSIKISDPQ FEGQTKAKLG NSEVRGAVDT FVSQRLQAYL 
EENPKPAKNI IEKALASRRA REAARKARDL TRKRSILDST TLPGKLADCQ STDLSENEIF 
IVEGNSAGGS AKGGRDNRIQ AILPLRGKIM NVEKANLDRI LNSEEIKAMI TAFGTGIGKE 
FDISKLRYGK IIIMTDADVD GAHIRTLLLT FFYRYMKPLI DEGHVYVAQP PLYKISHGRN 
ERYVYTDAER DKVLKELNVD NYKINRYKGL GEMNADQLWD TTMDPDHRVL LRVNEDLDST 
STDDTFSLLM GEKVEPRRNF IQENAKYVSN IDV