Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_13470 |
Symbol | |
ID | 8375552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | - |
Start bp | 1519008 |
End bp | 1522316 |
Gene Length | 3309 bp |
Protein Length | 1102 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644994263 |
Product | DNA/RNA helicase, superfamily II, SNF2 family |
Protein accession | YP_003151705 |
Protein GI | 256827746 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 126 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCTCAG AAAGAGCTTT GCAGCTTGCC TTTGGCAAAG CGACTGTGGC TAAAGGCGTA GGTCTTGCAA AGTGGGGTTT ACGTCTGCAT GATCGTACTG TTTCTTACCA GCAGGATCTC ACGTACTTGT CGTGCACCTT TTCGCCGGCT ACCTCGCATT ACAACGAAGA CTATGAGACA CAAGTTATTC TCGACGAGTC TCAGAATCGC ATTATCGATG CTAACTGCAC CTGCCCAGCA GCTGATCTAT CGAATGCATG CAAGCATATG GCAGCGCTCG TGTACGATTT TGGACTACGC GCTTCCCAAT ATGAAGGGTA TGACTTTGGG CATCACGCCC AAACATCGCC AAGCGTACTT GAAGCGATGC GATTAGCTGG AATACATACC GCTCAAAACG TTCGGCAGCG GGCGGGGCAC GCTCAGCAGG AATCCGAGCT TGCTATACAG AAGACCTTCT CGCTTATTCC CGAATTCACC CTCGATTACA CCGGGTGGGG TATTCGTTGT AAGGTGAGCG ACGGGACAAC GGAATACGTT GTTAAGGCGA TTGATGCTTT TTTAGCTCGG GTAGAAGCTG AGGATTTCTT TGCGTATGGC AAAAAGCTCG CATTCGTTCA TACACGCCAG GCATTTGACG AGCGTAGTCG TGTGCTTATC GACTTTCTTC AACGTGCTTC TCGTATCCGC CGCAGTGCTT TGCAGCAGGG ATACCACTTT GCTTCATCAT TCAGCTTGGG GCGCGAATTA CATCTGGTCG AAGCGGAATT GGCTGACCTG CTTGAACTGT ATCTGGGCAA TTCGGTGTCG CTTTCTGTAA GCGACTCAAA ACGCTCACGG GCACGGCGCG TGCGCGTGAT TGATGGCAAT CCGCCGTTGG AACTAACACT TGCCCCTTTA TCGGGCGGGG GTTGTCGCAT TCAATACGAT TCGGCGTTCG AAATAATCAA AGGCGATAAA GCGCTCTGGT TGTTTGATGG TCAGACCTTT TACCGCTGCG ATGCATCAGT GGCAGATATC GAATGGTTCT TGCGGAGCAT CTATAACGAA GATTCAGAAC GCATACTGAT TTCTGCCGAG GATGTCCCGA CTTTTTGTTC GACGGTACTT CCTGCAGTAA AGAGCGTTAT CACTATTCAG GCACCAGCAG AGTATGACAA GTACACTCCA CAGACGGGTG AGTTGCAATT TTACTTCGAT CGTCACGATG GGCTGGTTAC CTGTGATGTA CAGGCACGCT ACGGTGACCG TTCATTTTCG GTGCTCGATC CCATTCAGCC TGAAGGATTC TCTCGAAATA CAGCACTTGA ACAGGTCGCG CGTGATGTAA TCGCCCGCTA TCTTGAGGAG GCTCCCTTTG GGTTTGATGA TGGTGCCGAA GCCGAAGGTT TTGCAAGCGA TGGCTTTGGT GGGGTGTATT TCATTGCGGA AGATGATGAC GAACGTCTTG CGTGTTTGCT TTTTGGTGGA CTTACCGTGA TATCTCAGGT TGGTGAGGTG TTCACGACCG ATGCATTCGA TCGCTTAACA GCGCCCTCTC GTCCGATGGT AGCAGTGGGG GTGTCAATCC AATCTGATCT GTTAAACCTA TCCGTTTCGT CCGATCTTAT TCCAGCTAAA GAAATTGCAG CGCTGCTTAG TGCTTATCGG CTTCACAAGC GCTATCACCG CCTGAAGAAT GGCATGTTTA TTGATCTTTC GCAGGGCGAT TTGTCCGAGG CTGCTGCGCT GGCAGAGGAA CTGGGGTTGA CTGCTCAGCA GTTATCGCGC GGTTCAATTG AGCTTCCTTC TTACCAAGCA TTTCTTGTAA ATACGCTTGT GAGCGACGAT GAAAAGGACG ATTCGTTCTC TCAATGGATA GAGCAGTTTA ATCCACAACA GGCTGCCTCG CATGCTATTC CCGATAGTTT ACGCGGGGTA TTGCGTCCCT ATCAGGAAGA GGGATTTTGC TGGTTGGCGC ATCTCTGTGA TGTTGGCATG GGGGGCATTC TTGCTGATGA AATGGGTTTA GGAAAATCAG TTCAACTTAT TGCATTGATG GTGAGTCGAA GTCTTTCTCA TGCGCACACC AATCGAAGCA ATCTAATCGT CTGTCCAGCA TCACTGGTAT ATAACTGGCT TGCTGAATTC GATCGCTTTG CGCCACATCT GCGTGTTGCC GCGTTGGTGG GTACTGCCTC TGAACGTGAG GCTCTGCGCC AGCGTACCGA CATTGATGTG TATGTGACTT CGTACGATTT AGCCCGTCGT GATATTGAGC ACTTTGCAAA CTACCGCTTC GATTGCCTTG CCCTTGACGA GGCACAATAC ATTAAAAACC ATGCAACGCA GGCAGCACGA GCAATGAAAG CCATTCCAGC TGATCATCGC TTTGCCCTGA CGGGTACACC TATCGAGAAC CGTTTGAGTG AGCTGTGGAG CATCTTCGAC TTTCTGATGC CGGGACTGTT AGGCAGCTAT CGCCGGTTCC GCGATCGGTA TGACAAGCCT ATTGTGGAGG GAAACACGAA GATAGCCGAG CGACTTCGGC AGGCAACTGC GCCATTTATC TTACGGCGGC GCAAGGCGGA GGTACTAACC GATTTGCCTG ACAAACTTGA GTCGATTATT TCTGTTCGGT TAGAAGGAAA GCAGCGCGAT TTGTATCAAG CCCATGAAGC GCGCTTGCGC CAGTCGATTA AAAGCACTGA TGATGCCCGT TTTTCAACAG GCAAACTCGA AGTACTTGCA GAAATCACCC GCCTGCGTCA GCTCTGCTGC GATCCAGCTT TGGTATACGA CGACTATCGT GGCCCTGCAT CGAAGCTCGA TGCCATTGCC GACATCGTGG AAGGAAGTCG TGATGCAGGA GAGAAAACAC TCGTGTTTTC TCAATTCACA AGCTTTCTTT CACGTATTGC ACAGCGGCTT GATGAAATGG ACATTGCATA TCACACCATT ACAGGAGCTA CTCCTAAACA AACACGTGTG CAGTTAGTTA ATGCTTTCAA TAGCGATGAA GTGCCGGTAT TTCTTATATC GCTCAAGGCC GGTGGCACAG GGTTGAACCT TACAGGGGCG TCGGTGGTCG TGCATGCCGA CCCCTGGTGG AATGCGGCGG CAGAAGATCA AGCGACTGAC CGAGCACATC GTATCGGCCA AAAGCGCGAT GTAACGGTGT ATAAGCTGAT TGAGCACGAC ACCATCGAAG AGCGCATTGT CAAGCTGCAA GAGACCAAAC ATACCTTTGT TGATCAGATA ATAGGCGCCG GGGCAACGCC GTCGCTTGCT TCCTTAACGA AGGACGACTT ACTTGCGCTG CTTTCTTAA
|
Protein sequence | MISERALQLA FGKATVAKGV GLAKWGLRLH DRTVSYQQDL TYLSCTFSPA TSHYNEDYET QVILDESQNR IIDANCTCPA ADLSNACKHM AALVYDFGLR ASQYEGYDFG HHAQTSPSVL EAMRLAGIHT AQNVRQRAGH AQQESELAIQ KTFSLIPEFT LDYTGWGIRC KVSDGTTEYV VKAIDAFLAR VEAEDFFAYG KKLAFVHTRQ AFDERSRVLI DFLQRASRIR RSALQQGYHF ASSFSLGREL HLVEAELADL LELYLGNSVS LSVSDSKRSR ARRVRVIDGN PPLELTLAPL SGGGCRIQYD SAFEIIKGDK ALWLFDGQTF YRCDASVADI EWFLRSIYNE DSERILISAE DVPTFCSTVL PAVKSVITIQ APAEYDKYTP QTGELQFYFD RHDGLVTCDV QARYGDRSFS VLDPIQPEGF SRNTALEQVA RDVIARYLEE APFGFDDGAE AEGFASDGFG GVYFIAEDDD ERLACLLFGG LTVISQVGEV FTTDAFDRLT APSRPMVAVG VSIQSDLLNL SVSSDLIPAK EIAALLSAYR LHKRYHRLKN GMFIDLSQGD LSEAAALAEE LGLTAQQLSR GSIELPSYQA FLVNTLVSDD EKDDSFSQWI EQFNPQQAAS HAIPDSLRGV LRPYQEEGFC WLAHLCDVGM GGILADEMGL GKSVQLIALM VSRSLSHAHT NRSNLIVCPA SLVYNWLAEF DRFAPHLRVA ALVGTASERE ALRQRTDIDV YVTSYDLARR DIEHFANYRF DCLALDEAQY IKNHATQAAR AMKAIPADHR FALTGTPIEN RLSELWSIFD FLMPGLLGSY RRFRDRYDKP IVEGNTKIAE RLRQATAPFI LRRRKAEVLT DLPDKLESII SVRLEGKQRD LYQAHEARLR QSIKSTDDAR FSTGKLEVLA EITRLRQLCC DPALVYDDYR GPASKLDAIA DIVEGSRDAG EKTLVFSQFT SFLSRIAQRL DEMDIAYHTI TGATPKQTRV QLVNAFNSDE VPVFLISLKA GGTGLNLTGA SVVVHADPWW NAAAEDQATD RAHRIGQKRD VTVYKLIEHD TIEERIVKLQ ETKHTFVDQI IGAGATPSLA SLTKDDLLAL LS
|
| |