Gene Ccur_13470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_13470 
Symbol 
ID8375552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1519008 
End bp1522316 
Gene Length3309 bp 
Protein Length1102 aa 
Translation table11 
GC content50% 
IMG OID644994263 
ProductDNA/RNA helicase, superfamily II, SNF2 family 
Protein accessionYP_003151705 
Protein GI256827746 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones126 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCAG AAAGAGCTTT GCAGCTTGCC TTTGGCAAAG CGACTGTGGC TAAAGGCGTA 
GGTCTTGCAA AGTGGGGTTT ACGTCTGCAT GATCGTACTG TTTCTTACCA GCAGGATCTC
ACGTACTTGT CGTGCACCTT TTCGCCGGCT ACCTCGCATT ACAACGAAGA CTATGAGACA
CAAGTTATTC TCGACGAGTC TCAGAATCGC ATTATCGATG CTAACTGCAC CTGCCCAGCA
GCTGATCTAT CGAATGCATG CAAGCATATG GCAGCGCTCG TGTACGATTT TGGACTACGC
GCTTCCCAAT ATGAAGGGTA TGACTTTGGG CATCACGCCC AAACATCGCC AAGCGTACTT
GAAGCGATGC GATTAGCTGG AATACATACC GCTCAAAACG TTCGGCAGCG GGCGGGGCAC
GCTCAGCAGG AATCCGAGCT TGCTATACAG AAGACCTTCT CGCTTATTCC CGAATTCACC
CTCGATTACA CCGGGTGGGG TATTCGTTGT AAGGTGAGCG ACGGGACAAC GGAATACGTT
GTTAAGGCGA TTGATGCTTT TTTAGCTCGG GTAGAAGCTG AGGATTTCTT TGCGTATGGC
AAAAAGCTCG CATTCGTTCA TACACGCCAG GCATTTGACG AGCGTAGTCG TGTGCTTATC
GACTTTCTTC AACGTGCTTC TCGTATCCGC CGCAGTGCTT TGCAGCAGGG ATACCACTTT
GCTTCATCAT TCAGCTTGGG GCGCGAATTA CATCTGGTCG AAGCGGAATT GGCTGACCTG
CTTGAACTGT ATCTGGGCAA TTCGGTGTCG CTTTCTGTAA GCGACTCAAA ACGCTCACGG
GCACGGCGCG TGCGCGTGAT TGATGGCAAT CCGCCGTTGG AACTAACACT TGCCCCTTTA
TCGGGCGGGG GTTGTCGCAT TCAATACGAT TCGGCGTTCG AAATAATCAA AGGCGATAAA
GCGCTCTGGT TGTTTGATGG TCAGACCTTT TACCGCTGCG ATGCATCAGT GGCAGATATC
GAATGGTTCT TGCGGAGCAT CTATAACGAA GATTCAGAAC GCATACTGAT TTCTGCCGAG
GATGTCCCGA CTTTTTGTTC GACGGTACTT CCTGCAGTAA AGAGCGTTAT CACTATTCAG
GCACCAGCAG AGTATGACAA GTACACTCCA CAGACGGGTG AGTTGCAATT TTACTTCGAT
CGTCACGATG GGCTGGTTAC CTGTGATGTA CAGGCACGCT ACGGTGACCG TTCATTTTCG
GTGCTCGATC CCATTCAGCC TGAAGGATTC TCTCGAAATA CAGCACTTGA ACAGGTCGCG
CGTGATGTAA TCGCCCGCTA TCTTGAGGAG GCTCCCTTTG GGTTTGATGA TGGTGCCGAA
GCCGAAGGTT TTGCAAGCGA TGGCTTTGGT GGGGTGTATT TCATTGCGGA AGATGATGAC
GAACGTCTTG CGTGTTTGCT TTTTGGTGGA CTTACCGTGA TATCTCAGGT TGGTGAGGTG
TTCACGACCG ATGCATTCGA TCGCTTAACA GCGCCCTCTC GTCCGATGGT AGCAGTGGGG
GTGTCAATCC AATCTGATCT GTTAAACCTA TCCGTTTCGT CCGATCTTAT TCCAGCTAAA
GAAATTGCAG CGCTGCTTAG TGCTTATCGG CTTCACAAGC GCTATCACCG CCTGAAGAAT
GGCATGTTTA TTGATCTTTC GCAGGGCGAT TTGTCCGAGG CTGCTGCGCT GGCAGAGGAA
CTGGGGTTGA CTGCTCAGCA GTTATCGCGC GGTTCAATTG AGCTTCCTTC TTACCAAGCA
TTTCTTGTAA ATACGCTTGT GAGCGACGAT GAAAAGGACG ATTCGTTCTC TCAATGGATA
GAGCAGTTTA ATCCACAACA GGCTGCCTCG CATGCTATTC CCGATAGTTT ACGCGGGGTA
TTGCGTCCCT ATCAGGAAGA GGGATTTTGC TGGTTGGCGC ATCTCTGTGA TGTTGGCATG
GGGGGCATTC TTGCTGATGA AATGGGTTTA GGAAAATCAG TTCAACTTAT TGCATTGATG
GTGAGTCGAA GTCTTTCTCA TGCGCACACC AATCGAAGCA ATCTAATCGT CTGTCCAGCA
TCACTGGTAT ATAACTGGCT TGCTGAATTC GATCGCTTTG CGCCACATCT GCGTGTTGCC
GCGTTGGTGG GTACTGCCTC TGAACGTGAG GCTCTGCGCC AGCGTACCGA CATTGATGTG
TATGTGACTT CGTACGATTT AGCCCGTCGT GATATTGAGC ACTTTGCAAA CTACCGCTTC
GATTGCCTTG CCCTTGACGA GGCACAATAC ATTAAAAACC ATGCAACGCA GGCAGCACGA
GCAATGAAAG CCATTCCAGC TGATCATCGC TTTGCCCTGA CGGGTACACC TATCGAGAAC
CGTTTGAGTG AGCTGTGGAG CATCTTCGAC TTTCTGATGC CGGGACTGTT AGGCAGCTAT
CGCCGGTTCC GCGATCGGTA TGACAAGCCT ATTGTGGAGG GAAACACGAA GATAGCCGAG
CGACTTCGGC AGGCAACTGC GCCATTTATC TTACGGCGGC GCAAGGCGGA GGTACTAACC
GATTTGCCTG ACAAACTTGA GTCGATTATT TCTGTTCGGT TAGAAGGAAA GCAGCGCGAT
TTGTATCAAG CCCATGAAGC GCGCTTGCGC CAGTCGATTA AAAGCACTGA TGATGCCCGT
TTTTCAACAG GCAAACTCGA AGTACTTGCA GAAATCACCC GCCTGCGTCA GCTCTGCTGC
GATCCAGCTT TGGTATACGA CGACTATCGT GGCCCTGCAT CGAAGCTCGA TGCCATTGCC
GACATCGTGG AAGGAAGTCG TGATGCAGGA GAGAAAACAC TCGTGTTTTC TCAATTCACA
AGCTTTCTTT CACGTATTGC ACAGCGGCTT GATGAAATGG ACATTGCATA TCACACCATT
ACAGGAGCTA CTCCTAAACA AACACGTGTG CAGTTAGTTA ATGCTTTCAA TAGCGATGAA
GTGCCGGTAT TTCTTATATC GCTCAAGGCC GGTGGCACAG GGTTGAACCT TACAGGGGCG
TCGGTGGTCG TGCATGCCGA CCCCTGGTGG AATGCGGCGG CAGAAGATCA AGCGACTGAC
CGAGCACATC GTATCGGCCA AAAGCGCGAT GTAACGGTGT ATAAGCTGAT TGAGCACGAC
ACCATCGAAG AGCGCATTGT CAAGCTGCAA GAGACCAAAC ATACCTTTGT TGATCAGATA
ATAGGCGCCG GGGCAACGCC GTCGCTTGCT TCCTTAACGA AGGACGACTT ACTTGCGCTG
CTTTCTTAA
 
Protein sequence
MISERALQLA FGKATVAKGV GLAKWGLRLH DRTVSYQQDL TYLSCTFSPA TSHYNEDYET 
QVILDESQNR IIDANCTCPA ADLSNACKHM AALVYDFGLR ASQYEGYDFG HHAQTSPSVL
EAMRLAGIHT AQNVRQRAGH AQQESELAIQ KTFSLIPEFT LDYTGWGIRC KVSDGTTEYV
VKAIDAFLAR VEAEDFFAYG KKLAFVHTRQ AFDERSRVLI DFLQRASRIR RSALQQGYHF
ASSFSLGREL HLVEAELADL LELYLGNSVS LSVSDSKRSR ARRVRVIDGN PPLELTLAPL
SGGGCRIQYD SAFEIIKGDK ALWLFDGQTF YRCDASVADI EWFLRSIYNE DSERILISAE
DVPTFCSTVL PAVKSVITIQ APAEYDKYTP QTGELQFYFD RHDGLVTCDV QARYGDRSFS
VLDPIQPEGF SRNTALEQVA RDVIARYLEE APFGFDDGAE AEGFASDGFG GVYFIAEDDD
ERLACLLFGG LTVISQVGEV FTTDAFDRLT APSRPMVAVG VSIQSDLLNL SVSSDLIPAK
EIAALLSAYR LHKRYHRLKN GMFIDLSQGD LSEAAALAEE LGLTAQQLSR GSIELPSYQA
FLVNTLVSDD EKDDSFSQWI EQFNPQQAAS HAIPDSLRGV LRPYQEEGFC WLAHLCDVGM
GGILADEMGL GKSVQLIALM VSRSLSHAHT NRSNLIVCPA SLVYNWLAEF DRFAPHLRVA
ALVGTASERE ALRQRTDIDV YVTSYDLARR DIEHFANYRF DCLALDEAQY IKNHATQAAR
AMKAIPADHR FALTGTPIEN RLSELWSIFD FLMPGLLGSY RRFRDRYDKP IVEGNTKIAE
RLRQATAPFI LRRRKAEVLT DLPDKLESII SVRLEGKQRD LYQAHEARLR QSIKSTDDAR
FSTGKLEVLA EITRLRQLCC DPALVYDDYR GPASKLDAIA DIVEGSRDAG EKTLVFSQFT
SFLSRIAQRL DEMDIAYHTI TGATPKQTRV QLVNAFNSDE VPVFLISLKA GGTGLNLTGA
SVVVHADPWW NAAAEDQATD RAHRIGQKRD VTVYKLIEHD TIEERIVKLQ ETKHTFVDQI
IGAGATPSLA SLTKDDLLAL LS