Gene Ccur_13160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_13160 
Symbol 
ID8375521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1479563 
End bp1480879 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content53% 
IMG OID644994233 
ProductFlp pilus assembly protein, ATPase CpaF 
Protein accessionYP_003151676 
Protein GI256827717 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones127 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGA TGGAGCGTGT GCGTGCTGCG GGCAATGAAA CAGAAGCAGC CATTCGACAC 
GAAAGCATTG CCGAACTCAG ACGGCGGGTT CAGAATCAGG TCCCACCCGA TGTACTCGGT
CGCATGCGGG CAGAGAATCC AGCGCGGGCA GAAAATGAGA TACGCGCCGC GTGTACGGCA
ATTTTTGAGG ATGCACCATG GCTGATTGAT GCTGGTCAAG CGCGCGATCA GGCAATTGAA
ACATTACTAG ACGATGTGTT CGGACTGGGC CCACTTGAAT GGATGCTTGC CGATGAATCC
ATTACCGAAA TCATGGTTAA TGCGGCGGAT ACCCTGTATG TAGAACGCGA TGGCTTACTT
GAATCGCATT CGAACCCCTT TAACGGCAAC GATGAGGTGC GAGCTTTAAT TGATCGTATT
ATTGGCCCAT TAGGAAGGCG CGTTGACGAA GCGTCTCCTA TGGTGAATGC GCGGCTTTCC
CAAGGTCATC GGGTCAATGC GATCATACCG CCACTTGCTC CTGATGGACC AGTGCTGACC
ATCCGTAAAT TCCGCGAGCG TATTATCACG CTTGAAGAAA TGGTCGAATC GGCCTCAATC
GAAGCCTCGG TGCGTTTATA TCTTGTGTGG TGTGTGCACG CCAGGCGCAA TCTTGCTGTT
TCAGGGGGAA CAGGAAGCGG CAAGACAACC TTGCTGAATG CGTTGTCCTG CAAGATTGGG
CAGGCAGAAC GCATTATTAC CATCGAGGAT TCGCTTGAGT TGCGCTTTAC TGATCACCCT
CATGTCATAC GCCTTGAAGC GCGCCCGGCA AGTATCGAAG GCGCGGGCGA AGTAACTATC
CGTGACCTCG TCATTAACGC GCTGCGTATG CGTCCCGATC GTATCATCGT CGGCGAATGT
CGTGGTGGCG AGGCGCTCGA TATGCTGCAG GCCATGAATA CCGGTCACGA CGGATCGCTT
ACAACTCTGC ATGCTAATTC ACCAGCTGAT TGCATCCTGC GCTTAACTAC GATGGTGCGT
TACGCAGCCG ATTTACCGGT AGAAGTTGTT CAGGCTCAGA TAGGAAGTGC TATTCAATGC
ATCGTACAAA CTGCGCGCGA CAGATCGGGC GTGCGCTTTG TAACTGAAAT TGACGAGATT
TCCTACGACG GCACAAACCG TTGTTGTCAC ATGACCGTCG TGTATCAGCG CGCCTTTGCT
TCGGTTGGCG GCCAGTGGCT CACTATTCCT GCATGGCTTC TTGAGGCGAG CGATTTGCCA
GAGCCAGCTG AAGGAGGTGA AGCGGAATGG ATGAATTCAC TCTCTTTGCC GGATTAG
 
Protein sequence
MTLMERVRAA GNETEAAIRH ESIAELRRRV QNQVPPDVLG RMRAENPARA ENEIRAACTA 
IFEDAPWLID AGQARDQAIE TLLDDVFGLG PLEWMLADES ITEIMVNAAD TLYVERDGLL
ESHSNPFNGN DEVRALIDRI IGPLGRRVDE ASPMVNARLS QGHRVNAIIP PLAPDGPVLT
IRKFRERIIT LEEMVESASI EASVRLYLVW CVHARRNLAV SGGTGSGKTT LLNALSCKIG
QAERIITIED SLELRFTDHP HVIRLEARPA SIEGAGEVTI RDLVINALRM RPDRIIVGEC
RGGEALDMLQ AMNTGHDGSL TTLHANSPAD CILRLTTMVR YAADLPVEVV QAQIGSAIQC
IVQTARDRSG VRFVTEIDEI SYDGTNRCCH MTVVYQRAFA SVGGQWLTIP AWLLEASDLP
EPAEGGEAEW MNSLSLPD