| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_11980 |
|---|
| Symbol | |
|---|
| ID | 8375404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 1359274 |
|---|
| End bp | 1361223 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644994116 |
|---|
| Product | asparagine synthase, glutamine-hydrolyzing |
|---|
| Protein accession | YP_003151565 |
|---|
| Protein GI | 256827606 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.658522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 137 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGCA TCTGCGGATT CACAAAAACG AATACGGACA GCGACCAGAT TCTCAAAAAC
ATGTGCAACG TCATGGCTCA TCGAGGACCC GATGGCGAAG GACGCTATCT CGACGACAAT
ATCGCTTTGG GACATCGCCG CTTGTCTCTG ATCGACCTCG AAGGCGGCAG TCAACCAATG
GTGCGTTCAA CAGGCGATAA AACAGCTCGG GTGACCTCCC CCGCTCGCAC GCTTGATGGC
GCATTCTGCC AAGACAAACA GTCAGCGGCA GCACGCGGTG ATTATGCAAT AGTATTCAAT
GGTGAAATAT ACAACTACCA GGACCTTCGC GCCGAACTCG AACACGACGG TTGGACGTTT
GCGACTCATT CCGACACCGA AGTACTGCTC GTTGCCTATC TGGCGTGGGG AGAAGCGGCA
CTCCCCCGTC TTCGTGGCAT GTTCGCCTTT GCCATCTGGG ATAAAAAGAC CCACGAATTG
TTCTGTGCAC GTGACTTCTT CGGTATTAAG CCGTTCTACT ACACAGAGCA GCACGGCTCG
TTTATCTTCG CTTCCGAGAT TAAGTGCATT CTTGAGCACC CTGCCTATAC GCGCGAACTC
AATGAAGAAG CACTCGAACA GTACTTATGT TTCCAGTTTT CAGCGCTCGA CGAAACGTTC
TTCAAGGGCA TTTTTAAACT TCCTCAGGGT CACTGTTTAA CCGTACGTGC CGATGGCACC
TGCGATATCA AACGCTGGTG GCGCCCGTCT TTTGCGCCCG ATCATGCACA CAGTGAAGCC
GAAACCGTCC AGGCTATCGA TGAAACCATG CGTGAATCGG TGCGCTATCA CAATGTCGCG
GATGTTGAAG TTGGATCGTT TCTTTCTTCT GGCATCGATT CAAGCTATAT GGCTGCCTGC
TTGGCTACCG AAAATCCGGC GATTCATACG TTCACCGTGG GCTTTTCTGA ATATGAAGGG
GAACGTGACG AAATATCTTG GGCACGTGAA CTCGCGCAAG AACTGGGCAT ATCAAACGAA
AGTAAGCATA TAACCGAACA AGAATACTGG GATGTGCTAC CAGCTGTGCA ATGGCATATG
GATGAGCCAT CTGCTGACCC GTCGGCTGTA GCGCTTTACT TTGTCGATCA GTTGGCCGCC
AAACAGGTAA AAGCCGTACT TTCTGGCGAG GGAGCCGATG AATTTTTTGG CGGCTATCGC
GTGTACGAAA CACCACTTGA AAACGCTAAA CTCTCGTGGT GTCCAAAACC TATTTTACGA
GCAGCTGCAA AATTGTTGCG TGGCTTAGGA ATTCGCGGGG CAAATTATCT GGAGAGGGCA
AGCGAAACCG TTGAGGACTG GTACTACACA AATGCGAATG GTGTGGCGTT TTCTCCAGAT
CAGCGGGCAC GCTTGCTGAA AAAGACATCG GCCACTATGA AAACTCCTCA GCAGCTGACG
GCTCCGGTAT ATGCTGAAGC ATCCAGTCTT GATGAAGTTA CGCGTATGCA ATATCTCGAC
CTGCACTTTT GGCTGGTCGG CGACATCCTT CTGAAGACCG ACAAAATGGC AATGGCACAT
TCTCTTGAAT CACGGGTGCC GTTTTTGGAC AAAGAAGTAT TCAATGTTGC TGCTTCTATT
CCCACTGCAC TCAAGGTAAG CGACCATCAA ACGAAGATTA CCCTGCGCCA AGCGGCTGAA
CGTGCCATAC CAACCGACTG GGCACAAAAG CAAAAACTTG GCTTTCCCGT GCCCGTTGCT
AACTGGCTGA AACAGGACAA GTACTACGGG CTTGTCAAAG GCTGGTTTAC TGGCGAGGAA
GCACAGCGCT TTTTCAACAC CGACGAACTC GTGCGCTTAC TCGACGAACA TAAAGCGGGC
ACGCGTGATA ACACGCGCCG CATCTGGATT GTCTACATGT TCCTTATGTG GTACCGCATC
TATTTTGTCG ATCGCAAAAA GCCAGCGTAG
|
|---|
| Protein sequence | MCGICGFTKT NTDSDQILKN MCNVMAHRGP DGEGRYLDDN IALGHRRLSL IDLEGGSQPM
VRSTGDKTAR VTSPARTLDG AFCQDKQSAA ARGDYAIVFN GEIYNYQDLR AELEHDGWTF
ATHSDTEVLL VAYLAWGEAA LPRLRGMFAF AIWDKKTHEL FCARDFFGIK PFYYTEQHGS
FIFASEIKCI LEHPAYTREL NEEALEQYLC FQFSALDETF FKGIFKLPQG HCLTVRADGT
CDIKRWWRPS FAPDHAHSEA ETVQAIDETM RESVRYHNVA DVEVGSFLSS GIDSSYMAAC
LATENPAIHT FTVGFSEYEG ERDEISWARE LAQELGISNE SKHITEQEYW DVLPAVQWHM
DEPSADPSAV ALYFVDQLAA KQVKAVLSGE GADEFFGGYR VYETPLENAK LSWCPKPILR
AAAKLLRGLG IRGANYLERA SETVEDWYYT NANGVAFSPD QRARLLKKTS ATMKTPQQLT
APVYAEASSL DEVTRMQYLD LHFWLVGDIL LKTDKMAMAH SLESRVPFLD KEVFNVAASI
PTALKVSDHQ TKITLRQAAE RAIPTDWAQK QKLGFPVPVA NWLKQDKYYG LVKGWFTGEE
AQRFFNTDEL VRLLDEHKAG TRDNTRRIWI VYMFLMWYRI YFVDRKKPA
|
|---|
| |