Gene Ccur_11970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_11970 
Symbol 
ID8375403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1357585 
End bp1358961 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content47% 
IMG OID644994115 
ProductSNF family Na+-dependent transporter 
Protein accessionYP_003151564 
Protein GI256827605 
COG category[R] General function prediction only 
COG ID[COG0733] Na+-dependent transporters of the SNF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.277422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones137 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA AGACTGAACG AGCCTTATGG TCGGGCAAAT GGATGTTTAT CCTGTCTGCT 
GCCGCCAGTG CGGTGGGTTT GGGAAACATG TGGCGTTTTC CGTATCTTGC GGCGAAGTAT
GGCGGCGGCA TTTTTATTCT TACATATCTG GTACTCGTAT TTACTTTTGG CGTTTCGATG
CTCTTGCTTG AAACGGCTTT TGGTCGCAAG ACGGGTCAGT CAGTTATTGG GGCATTTCGC
TCGTTTGGTA AGAAATATAC CTTTATCGGC GTACTTGCCT CGGCAGTGCC GTTTATTATT
ACGCCGTACT ACTGCATCAT CGGCGGCTGG GTTGCAAAGT ATATGGTGTC ATATGTGACG
AACTCGCCAG CTGATATGGC TGACGGTGGT AATTTCTTCG TAAACTTTAT TGACAGTACT
GATTCAAGTT TCTTGTTTAT GCTGCTGTTT ATGGCTGCGG CATTTCTTGT TGTTTCGTTG
GGTGTTAAGG GTGGCATTGA AAAGGCTAAC CTGGTTATGA TGCCTTTGCT ATTGGTAGCT
GCTGTCGCTA TTGCTGTGTA CGTGGCAACG TTTCCTGGAG CGCTGGGTGG CATTGCCTAT
TATTTAACGC CTGATTTCAG CAAAATGTCG CCGGAGCTTC TTATTGGCGC ATTAGGGCAG
ATGTTCTACA GTTTGTCGCT GGCCATGGGC ATTATGGTTA CGTATGGTTC ATATCTCGGT
AAGAAGGAAA ATCTTACGAA GAGTGTGGCA TGGATCGGCG GTGCTGATCT AGCTGTTTCG
ATTCTTGCCG GTTTAATGAT TGTTCCTGCA GCGTTTATCG CCATGGGTTC AGCTGATGCA
GTGGCGGCTA AATCGGGCCC TTCCCTTATG TTTATCACGC TGCCTTCGGT GTTCCAGCAG
ATGGGTGGTA TTGCTCCAGT TATCGGTTTT GCCTTCTTCC TGCTGGTGTT CTTTGCTGCA
TTAACAAGTG CTATCTCGCT TATCGAAGCA TGCGTTTCTA TCATTAGTGA TGGAGCTGGT
TGGTCGCGTC GTCGCTCTCT TATTACTACG GTTTTTGTGG TAGTAGTCGC AGGTATTATC
ATTAACCTTG GCTACAACGG CCTTTCGTTC ATTCAGCCTT TGGGCGAAGG TTCAACGCTC
CTTGATTTCT TCGACTTCAT TTCGAATTCG GTGCTCATGC CTATCGTGGC ACTGATGACG
GTTATCTTTA TCGGTTGGAT CATGAAGCCG AGCATTATCA TCGAAGAGGT GAAGCAGTCT
TCAGACTTCA AGCTGGAGAA GGCGTGGACG GTTATTATCA AATATGTAGC GCCGGTGCTG
CTTGTGGTTA TTCTGGTTGC TTATGTCGGT GCACAGTTTG GCCTGTTCAG CTTCTAA
 
Protein sequence
MTQKTERALW SGKWMFILSA AASAVGLGNM WRFPYLAAKY GGGIFILTYL VLVFTFGVSM 
LLLETAFGRK TGQSVIGAFR SFGKKYTFIG VLASAVPFII TPYYCIIGGW VAKYMVSYVT
NSPADMADGG NFFVNFIDST DSSFLFMLLF MAAAFLVVSL GVKGGIEKAN LVMMPLLLVA
AVAIAVYVAT FPGALGGIAY YLTPDFSKMS PELLIGALGQ MFYSLSLAMG IMVTYGSYLG
KKENLTKSVA WIGGADLAVS ILAGLMIVPA AFIAMGSADA VAAKSGPSLM FITLPSVFQQ
MGGIAPVIGF AFFLLVFFAA LTSAISLIEA CVSIISDGAG WSRRRSLITT VFVVVVAGII
INLGYNGLSF IQPLGEGSTL LDFFDFISNS VLMPIVALMT VIFIGWIMKP SIIIEEVKQS
SDFKLEKAWT VIIKYVAPVL LVVILVAYVG AQFGLFSF