Gene Ccur_11820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_11820 
Symbol 
ID8375389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1340621 
End bp1343098 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content53% 
IMG OID644994102 
Productphenylalanyl-tRNA synthetase, beta subunit 
Protein accessionYP_003151551 
Protein GI256827592 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones116 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTT CTCTGAAATG GCTTTCTACC TATGTCGCAG TACCCGATAA CACGAAAGAG 
TTTTGCGATC GTTTGGATTT AACCGGCACG GGTGTAGAAG GGGTTGACGA AACAGGCGCC
GCATTTTCAG GCGTTTATAC CGGTCAGGTA GTTGAAAAGA TTCCCCATCC CAATTCGGAT
CATATGTTTA TCACCCAGGT CAACGTGGGT CTGCGTAATG TGGATGCCGA TGGCAACCCC
GAACCGCTTC AGATTGTGTG TGGTGCGCAG AACTTCTACA AGGGCGATAA GATTCCCGTT
GCCCTGGTAG GTGCAAAGTT ACCAGGTGAT ATTACCATCA AAAAAAGTAA GTTGCGTGGC
CAAGTCAGCA TGGGTATGAA TTGCTCGGCG CGTGAACTTG GCTTGGGCGA AGATGTCGAC
GGGCTGTATA TTCTTCCGGA GAACACCCCG CTTGGCTTGG ATCTCGCTCA GTATCTTGGC
TTGTCCGATC GTATTCTCGA TTTGGAAATT ACTCCCAATC GACCTGATTG CCTTTCGATG
GAAGGTATGG CGCGTGAAGT GGGCGCTATG TATCGTATTC CCGTTACCGA TGTCCGCGAA
GGACGCACGC TCAAAGAAGG CGGTCAAGCC ACTGCCGATA TGGTTGAGGT ATCCATTGAT
GAAGCGTCGC TTTGTCCGCG CTATACCGCA CGGGTGATAC GCAATGTAAA GGTGGGTCCA
AGTCCGCAAT GGCTTGCTGA ACGTATTGCT GCGGCAGGCG CTCGACCTAT CAATAATGTG
GTTGACGCAA CCAACTATGT GCTGTTTTTG CTGGGTCAGC CGCTCCATGC ATTTGACTTC
AATAAGGTTG CGGATGCCAG CGGCAAGGCG CACATTCGGG TGCGCGCGGC AGCGGAGGGC
GAAAAGCTCA CGACGCTTGA CGGCGAAGAG CGTACTCTGA CCAGTGATAT GACGGTAATA
GCAACGCCTG ATCGTGCAGT GGCATTAGCT GGGGTAATGG GCGGCCTTGA TACCGAAGTA
GTTGATACTA CCTGCGATAT TCTGCTTGAG GCAGCTACCT TTAGCCCTGC CCATACAAGC
CGCACGAGCC GCAATCTGGG GCTTATCAGC GAAAGCAGCA TGCGCTATGA GCGGCGTGTT
GACGACGTCG ATATCGATAA ACGCGCTGAT TTTGCGGCAT CTCTTATTGC AGAGCTTACC
GGAGGTACGG TCTGCCGGGG ATTGGTAGAT GTGTGGCTCG AAAAGACCGA GCCGGTGCAG
CTAACGTTTC GCACGAAGCG CTTCTGTTCA ATGATGGGCG TTGAAGTGTC CATCGAAGAG
GTCTCAGATA TTTTGCGGCG TCTTGGTTGC ACGGTTGAAG CTGCTGAGAC GGAAACTTCT
GGGGAAGAGG GCACACTGTC GGTGGTTGCC CCCACATTCC GCCCCGATTT GGAACGCGAG
ATTGACCTCT ATGAAGAAGT TTTGCGTCTC CATGGTATGG AAAACGTGCC GCCCACCTTG
CCGGGCGGTC GTGGGCGTGT GGGCAAGCGG TCGTGGTCAG AGCAGGTGGT TGCAACCCTG
CATCACACCC TGTCAGCGAG TGGACTCAAC GAAACCATGA CCTATTCGTT TGCAAGCCCC
GATGATCTTG CACGACTGCG TATGAATACG GTTATTGATG GCGAACCAGT CGAGCTTATC
AACCCAATTA ACGCCGACCA GTCGGTGATG CGTCAGAGTA TTGTTCCGGG CTTGCTGCAC
AGCGTTGCAT ACAACCAGAA TCACGGGGTG GCAAATATTC AGCTCTACGA GATTGGCAAT
GTATTCGCAG CACACGAAGG GCGTAAGTTG CCACGGCAGC GTGTAAAGTT GGCGGGCGTT
TTAGCAGGGT CGCTTCACGA GACCGGCTGG AATCGCCATG CGGTTGAGCT TAATTTCTTT
GATGGTAAAG GTGTGCTTGA AAATATTGCA CGTGAGTTGG CAATCCCGAA GATTCGTTTT
CGCGCTCTTG ACGAGCAGGC AGCTTCCTTT TTGCAGACAG GTCGGGCAGC CGAAATGCTT
TCAGCTGGCA CTGTTATTGG CTGGGTAGGA GAAATTCATC CACTGGCTGC ACAGGCGTTT
GAAACGCAGG CCCCCATTGT GGCGTTTGAA CTCGATGTTG ATGCATTGGT AAAGTCGGCG
CGCATCGAGC GTGAAACATA CGAGGTACCG GAATTTCCGC CGGTTTCGCT GGACGTAGCG
TTTGTTGTTG ATGAAGACGT AACGAACGAA CGTCTTGAGC AGTGCATGCG TAGCGCTGGT
GGCAAGCTTC TGAGCAATAT TCGTCTGTTT GATGTGTATC GCGATGAAGA ACGCATCGGC
GCCGGTAAAA AGTCGATGGC CTATGCACTT GAGTATCAAT CGCTTGACCA TACACTTACA
AGCGAAGAAG TCGAGAAGGC TCATAGTCGT CTGGTGAAGA AAGTTGGTAA CGCTACCGGA
GCTGAAGTAC GTGGATAG
 
Protein sequence
MKVSLKWLST YVAVPDNTKE FCDRLDLTGT GVEGVDETGA AFSGVYTGQV VEKIPHPNSD 
HMFITQVNVG LRNVDADGNP EPLQIVCGAQ NFYKGDKIPV ALVGAKLPGD ITIKKSKLRG
QVSMGMNCSA RELGLGEDVD GLYILPENTP LGLDLAQYLG LSDRILDLEI TPNRPDCLSM
EGMAREVGAM YRIPVTDVRE GRTLKEGGQA TADMVEVSID EASLCPRYTA RVIRNVKVGP
SPQWLAERIA AAGARPINNV VDATNYVLFL LGQPLHAFDF NKVADASGKA HIRVRAAAEG
EKLTTLDGEE RTLTSDMTVI ATPDRAVALA GVMGGLDTEV VDTTCDILLE AATFSPAHTS
RTSRNLGLIS ESSMRYERRV DDVDIDKRAD FAASLIAELT GGTVCRGLVD VWLEKTEPVQ
LTFRTKRFCS MMGVEVSIEE VSDILRRLGC TVEAAETETS GEEGTLSVVA PTFRPDLERE
IDLYEEVLRL HGMENVPPTL PGGRGRVGKR SWSEQVVATL HHTLSASGLN ETMTYSFASP
DDLARLRMNT VIDGEPVELI NPINADQSVM RQSIVPGLLH SVAYNQNHGV ANIQLYEIGN
VFAAHEGRKL PRQRVKLAGV LAGSLHETGW NRHAVELNFF DGKGVLENIA RELAIPKIRF
RALDEQAASF LQTGRAAEML SAGTVIGWVG EIHPLAAQAF ETQAPIVAFE LDVDALVKSA
RIERETYEVP EFPPVSLDVA FVVDEDVTNE RLEQCMRSAG GKLLSNIRLF DVYRDEERIG
AGKKSMAYAL EYQSLDHTLT SEEVEKAHSR LVKKVGNATG AEVRG