Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_11020 |
Symbol | |
ID | 8375309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | - |
Start bp | 1253669 |
End bp | 1256545 |
Gene Length | 2877 bp |
Protein Length | 958 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644994024 |
Product | YhgE/Pip-like protein |
Protein accession | YP_003151475 |
Protein GI | 256827516 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | [TIGR03061] YhgE/Pip N-terminal domain [TIGR03062] YhgE/Pip C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.458925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 132 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTACGG TGCTGCGCAT TTTTCAGCGT GACATAGTGC GTCTAATAAA AAATCCGTTT GCCCTGGTGG TTATTGTGGC AATGTCGGTT CTGCCGGCAT TGTATGCATG GTATTGCATT GAAGCAAACT GGGACCCTTA CGAACATACC AATGGACTGC ATATTGCCGT CGCTAACGAA GACGTTCCGA CAACGGTCGA AGGGATGGGA TCGGTCGACG TCGGCGGTCA AATAGTTGAT CAGTTATCAC AAAACAGTCA GTTTAGCTGG GAATTTGTTT CAAAAGGTGA AGCGATAGAC GGAGTTAAGT CAGGACGCTA TTACGCTGCC TTTGTGATCC CCTCGTCGCT TTCTGCTGAC TTTACCAGCG CACTGTCGGG CGACCGACAT GAGCCACATA TCGATTACTA CGTCAATGAA AAGTACAGTT CAACCGCTGT AAAAGTAACC GATGCTGGAT CAACGGCAAT CGAGCGTCAG GTAGAGGAAG CCTTTTCAAA AGCGGTATCC GAAGCGCTTA TCGGTTTGTT GAAAGACCGA GCTGGCGACA TTGAAAGCCA GATTGATACA GCTGATGGGC GTCTTTCTCA AACGGTCACT GGGGCAAATG AACAGGTGGC TCAAATCATC GATACGCTAC AGGACGTTTC GCAGTCTATC GACTCGTGGT CGCATGTCGT TGACAATGCT CAAGAAACGC TCGATGTGCT TGAAACTGCC GTGCCGCAGG CATCAACGTC TATCGATGAT GCAGCGCGCG TTCTTTCTCA GGTACGCACT TCATCGGATG GCTTCAGTTC ATCGCTCGCA GGGACCCTTA CCCAGAGTGG TGCGCTTATA GGGAGTACTT CTTCGCAGGT AAATAGCCAG GTTAACGATG CTGTTGGACG CATTATGGTG GCGAAGGCTG ACGTGGATAG TGTGCTTACC CGTCTTCAAG GGGTTATCGC GCAGAACGAC CAGATTATTA GTCAGTTGCA AGATGCCGCT GCGGCACTGC CGGCGGGCAG CGCGAAGACT ACCGCGCTCA ATACGATTGC GCGTTTGCAA TCCCATAACG ATACGCTCAG GCAGCATGTC AATAACCTCT CAAATGTCAG TACGAGCCTC GGTCGTGCTA CTCTTGCTGC GCAGAATCTT TCGAATGCTA TGAACACGAC AGTGCAGACG GGTGCTCAAT CCATCATGGT CACGGGAACA GCTCTTGCTG CAAGTGCGTC GCGTATCGGC GGTTCGCTTG ATTCGCTCGT GCTGTCGATG GGCGGTCTCT CTGGGGCAGT TTCTGGACTA GGCCCGCAGG TGGAAGAAAT TTCTTCGTTG CTTTCACAGG CGCAGGGTGT CTTTAGCCAG GTTCAAGCGT CTCTTTCTAA CACGGAAAGT TCTCTTGGTG CGGTACAAAA GCACGTTGAC GACACTGTTG ATGATATCCG CGCCATCGCT TCAGCGCTCG AAGCCGATCA ACTTTCTGTG GTGCTTGGTC TTGACGTAAC AAGCATTGGC GAGTTCATGT CGTCGCCGGT TACCCTTGAT ACCGAAGTGC TCTATCCGGT GGAGCATTAT GGTGCAGCCG TTGCCCCGTT CTATACCAAT CTGGCTATTT GGGTCGGCTG CTTTATGTTG ATAGCTATTC TTAAGATGGA AGTCGATCGC AAAGGGTTTG AATCGATGAC AGCTGTGCAG GCTTATATGG CTCGCTGGCT GCTGTTCGTT TTAGTTTCCT TAGTTCAGGC GGCGATTATC TGTATCGGTG ATGTGGCATT GGGCATTGGC TGTGTCGACC CGATATCGTT TGTTATTGCG GGGCTCGTTA CAAGTTTTGC CTTTGTGAAC GTGGTTTTCA TGTTAGGGAT TACCCTGAAA CACATTGGCA AGGCGCTTGC TGTGCTGTTG CTTATCATGC AGATTCCTGG TTCGTCGGGT ATGTACCCTA TCGAAATGAT GCCGTCCTTT TTCCAACAGG TACATCCACT CTTACCCTTC ACCTATGGTA TTTCTGCCAT GCGCGAGGCA ATTGGGGGCA TGTACGGCGG TGCATATGCC GCCAACATAG TGGTGCTTTT GCTTATCGCG GCGGTTTCGC TACTCATCGG CTTATTTGTC CGTCCGTATG TTCTTAATTT GAACGTGTTG TTTGACAAAC GATTACGCGA AACGACCTAT ATGGTCAATG ACGATCAAGG CCTGCGCGAA CCGCGTTATC GTGTGCGCAA CGTGGTGCGT GCTCTTTTGG ACAACGACGA ATACCGAAGC GTTTTGCTTG GTCGTGCGAC GCGCTTCAAC CGTCGCTATC CATCTATTGC ACAGATCAGT CGTATTTCAA TAATCGTCCT TCCACTTGTT GCTCTGGTTA TCATGTGCCA ATTTTCGCTG GGGCCGAACG GCAAGGTGCT CATGATTGTG GGCTTTGTCA CGCTGGTTGT TTTGCTGGGA TGGGCGCTGG TCCTTATCGA GTACTTCCAT GATTACTTGA ATAACCAGGT GCGCATGGTT GCGCACAGTG GAGAAGATTT GATGGCTGAT GTGATGGGTC ACACTCCACT GCGCCACAAG GATTTTTCTG CCAACCACGC CGAAAATGTG CGTGCGGTAC TTTCCCGTTT GCGTGAAGTA CCTCAGAAGA ATGCCGCTAC AGAAGAGCTC TCCTCGGGCG AGGTCTTGAA TGATGTTTCG AGTGATATTC CAAGTAAAGC GTTAAATGGT GCTTCAGATG CAGTATTAGA TGGTGCTGCG AGTGACGCTT CGGATGAAAC TTTCCATAAG GTGCCGAACG GCATTTCAAG CGATACTGCA GAGACTCCTT CGGACAGCAC TTCAGATGGT GCTTCGAAAA CGTCAGACGA TGCTTCGGAC GCGTCTATTG ATAAGGAAAA GCGGTGA
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Protein sequence | MGTVLRIFQR DIVRLIKNPF ALVVIVAMSV LPALYAWYCI EANWDPYEHT NGLHIAVANE DVPTTVEGMG SVDVGGQIVD QLSQNSQFSW EFVSKGEAID GVKSGRYYAA FVIPSSLSAD FTSALSGDRH EPHIDYYVNE KYSSTAVKVT DAGSTAIERQ VEEAFSKAVS EALIGLLKDR AGDIESQIDT ADGRLSQTVT GANEQVAQII DTLQDVSQSI DSWSHVVDNA QETLDVLETA VPQASTSIDD AARVLSQVRT SSDGFSSSLA GTLTQSGALI GSTSSQVNSQ VNDAVGRIMV AKADVDSVLT RLQGVIAQND QIISQLQDAA AALPAGSAKT TALNTIARLQ SHNDTLRQHV NNLSNVSTSL GRATLAAQNL SNAMNTTVQT GAQSIMVTGT ALAASASRIG GSLDSLVLSM GGLSGAVSGL GPQVEEISSL LSQAQGVFSQ VQASLSNTES SLGAVQKHVD DTVDDIRAIA SALEADQLSV VLGLDVTSIG EFMSSPVTLD TEVLYPVEHY GAAVAPFYTN LAIWVGCFML IAILKMEVDR KGFESMTAVQ AYMARWLLFV LVSLVQAAII CIGDVALGIG CVDPISFVIA GLVTSFAFVN VVFMLGITLK HIGKALAVLL LIMQIPGSSG MYPIEMMPSF FQQVHPLLPF TYGISAMREA IGGMYGGAYA ANIVVLLLIA AVSLLIGLFV RPYVLNLNVL FDKRLRETTY MVNDDQGLRE PRYRVRNVVR ALLDNDEYRS VLLGRATRFN RRYPSIAQIS RISIIVLPLV ALVIMCQFSL GPNGKVLMIV GFVTLVVLLG WALVLIEYFH DYLNNQVRMV AHSGEDLMAD VMGHTPLRHK DFSANHAENV RAVLSRLREV PQKNAATEEL SSGEVLNDVS SDIPSKALNG ASDAVLDGAA SDASDETFHK VPNGISSDTA ETPSDSTSDG ASKTSDDASD ASIDKEKR
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