| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_10350 |
|---|
| Symbol | |
|---|
| ID | 8375242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 1172722 |
|---|
| End bp | 1176339 |
|---|
| Gene Length | 3618 bp |
|---|
| Protein Length | 1205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644993957 |
|---|
| Product | cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC |
|---|
| Protein accession | YP_003151408 |
|---|
| Protein GI | 256827449 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones
[V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit
[TIGR02868] thiol reductant ABC exporter, CydC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.247589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 130 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATA AAAGACTGTT TGAACTCGCG CCCGAAGCAC GCATACCGGT ATTTATCTCC
GTTGTGCTTA AAGTAGTCGC GCTCTTTGCA AATATCATCA TGATGATTGC TTTAGGTCGA
GCCATCGAAG GAATCTTTCA GGGAACATCA ACCTTACTCG ATAGCGGAAC TCTGGCGCTC
GTGGCTGTCG CCCTCATCGT TCGGGCGGTC GCTGGATATG GCACACAGCG CGCCGGTGAT
ATAGCAGCAG TTGCCGCCAA GAAATCCATT CGAACAAAGA TTTACAACAA GCTCGTTTCT
CTTGGTCCTG CCTACCAAGA GACCGTGTCA ACTTCTGAAG CAGTACAATT AGCTGTTGAA
GGGTCCGAAC AGCTCGAAGT GTATTTTGGT GGCTATGTGC CTCAACTTTT CTTTTCCCTC
ATTGCACCTG TTATTTTATT TATCTGTCTG TTGCCCATTG CAGCAGGTCC AGCGTGTATG
TTGCTTGCCT GCGTAGTGTT TATTCCTGCG CTCATTATTA TCGTGCGCCG CAAAGCTACC
GCGGTGGCTG AAGATTATTG GGATACTTAC GCCGATCTTG GAAGCATGTT TTTAGAAGAC
CTCCAAGGCA TGACGACCCT TAAGATCTTT CAAGCTGACA AGATGCGCCA TCAGCAGATG
AACAACACCG CAGAAGGATT CCGCAAGGCA ACCATGCGTA TGTTGGGTGT ACAGCTCACC
TCAATTGGCG CTATGGACGT AGTGGCATAT GGCGGTGCAG CAGCCGGTAT TGTGGTGGCC
CTCGTACTCC TTTTTCAGGG TTCGCTTTCG TTTGCTGCTG CTTTTGCTGT TGTATTTCTT
TCTCAAGAGT TCTTCTTACC CATGCGGGCA CTCGGATCGC TCTTCCACGC AGCTATGAGC
GGCATGGCCA GTTCGGTACG TATATTCGAA CTTCTCGATA CGAAGGAAAC ACCGCGCAAA
GACGCAAAAC TTACAGCGCA GCAATGCGAA CTTTCATGCC GTACGGTGGG CTATACCTAT
CCCGGCAGCT CGGCGACACC AACGCTTCAC TCGATTAACC TCGACTTCCC TGCTAACAGC
TTTACCGGTA TCGTCGGGAA AAGTGGTGCC GGTAAGTCCA CACTCGCCGC TGTGCTTTCC
GGTCACGCTG ACGCATACAC GGGCACGGTA GCTATAAACG GCGTGGAATT GCGCGACCTC
TCTGCAAGCA CACTCGCTAC TCTAGTAACC GTTGTGCCGT CCGATAGCAT GTTATTCGCT
GGTAGCATAC GGGAAAACTT GCAGATGGCT GCACCGTGCG CAACGGATGC GGCTATGGAA
GGTGCCCTTG GACGCTGCGG AATACTTAAC TTCGTGCGCA CGGCGGGTGG CCTCGACCTA
GTACTTTCTG AAGGCGGCTC GAACCTTTCA GGTGGTCAGC GCCAACGCAT CGCGCTTGCG
CGCGCCCTTC TCCATGACAC GCCGATCTAC GTGTTTGATG AAGCAACTTC AAGTATCGAC
GCTGAAAGTG AAAAGGCAAT CTCTGAAGTC ATCCGCAGCA TGAAAGGCGA TCGGACCGTC
ATCGTTATTG CGCATCGCCT ATCGCTTGTT AAAGAAGCCG ATAACATTGT GGTCCTTGAT
GGCGGCACTG TCGCCGAAGA GGGTTCACAT GCAGAACTTG TACAAACCAG TGGTCTGTTT
GCGCAATTAT GGGAAAGCCA ACGCCATCTG GAAGAACGTG CAGCCGCAGC TGAAATGGCG
GCAAATAGTA ATGTGATAGC TGCAAGCAGA ACCGTTGCAG CATCTACAGA CAGGGTCTCC
TCGACGGCCG TACACAAGAC ACCAGCGCAA CCCGAATCAC CTGAAAGCAG CACAAGCACA
TCAGCTCGTT CGGCAGCTAG CTCGACACAT CAACCAACCC AAGCAGCACA TCAACCCGAT
CGGGCTACCT CAATAAACCA AGCAGCAACC CCGAAGCGTT CGAACTTCGC AATTATGCGG
CGCCTTATCA AGCTGGTACG TCCACTTGCT CCCCGCATGG CCCTTGCCAT CACGTTGGGT
ACTATAGGAT TCCTTGCCGC CATATTCCTA ATGGCGTTCG CGTCGTACGG TATCGTCGAA
GGAACACTCG GTACTGGGGC TTCCCTTTCG CTGTTGTGCG TCGCAGCCGT TGCCTGCGGC
ATCCTCCGCG GACCACTGCG CTACGGTGAA CAACTATGTA ACCACGACAT CGCTTTTCGC
ATACTCGCGT ATATTCGCGA TGTGCTTTAC GGCGCGCTGC GGCGTCTCGC ACCAGCGAAG
CTTGAAGGTC GCGCTAAGGG CGATCTTGTG TCAGTAGCCA CTGGCGACAT CGAATTGCTT
GAAGTGTTTT ATGCACACAC CATCTCGCCG ATAGCGATCG CCTGTATTGT CAGCGTTATT
ATGCTTGTCT TTTTTGGCGC CACCGTTCCT GAAGTGGTGC CGCTTGCGCT CGCGAGCTAT
CTCCTTGTTG GTGTGGTACT GCCCATTTTC GCTTCTCATA TCTCTGGAAA AGCAGGTGAA
CACCTGCGCG AAGGACAAGG CCGTCTTGAA TCGTTTACGC TCGAAAGCTT GCGTGGTATG
CGAGAGCTTT TGCAGTTTGG ACATACCCAA GAGCGTGGAA ATACTCTTAC TCAGATTACC
AATGAACTCT GTAAAGTAGA ACTTTCTCTC AAAGCACGCT CGGCTGCCAT GGAAGCGGCG
ACACAAGCAA TTGTTGGATC ACTTGCTATT GGCATGGTGC AGTTTGCCTT CGCGCTGGCA
GCATCCGGGA CAACAGAACT GGGAGCTGCT TTTGTGGTTG GCTTCACGTT TATGTCCTCG
TTTGGACCGG TGCTTGCCCT GATGCGTCTT GGCACCACAC TGCAGCAAAC TTTTGCTTCA
GGTGGACGTG TTCTCGATAT ACTCGATGAA ACACCCGAAA CGCTCGAAAT AGAAGACGGC
TCCAATATAG AATTCTCTGG CGCTGAATTC GATGATGTCT CATTCTCATA TGCTGGCGCA
CACAAACAGG TTCTTGAACA GGTAAGATTC GCTATACCAC AGGGAGAAGC AGTAGCTCTT
GTGGGAGAAA ATGGCTGCGG CAAGTCAACA ACACTGAAAT TGCTCATGCG TTTCTGGGAT
ACGTGCAGTG GTGCTGTGCG TATTTCTGGA CATGATGTGC GCGAAGTACA TACTGCAAGT
TTGCGTTCAA ACGAAGGGTA CCTCACCCAA GATACCCACC TGTTTGCTGG CACCATCGGC
GAGAACATTC GTCTGGCAAA GCCTGATGCA ACTGACGATC AGCTGCGGGC AGCTTGCGCC
AAGGCAAGCG TGCTCACGCT TATAGATAGC TTGCCATCTG GGTTCGACAC ACCAGCTGGT
GAACTAGGTG GACGACTTTC TGGTGGTGAA CGTCAGCGCA TAGGTCTTGC CCGTATCTTC
CTTCAAGATG CACCATTTTT GTTACTTGAC GAGCCAACAT CAAATATCGA TGCGCTCAAT
GAAGCAGCGA TTGTCGAAGC ACTCGAAGGC GAAAAAGCAC GGAAGACCAT TGTGCTTGTC
AGCCATCGCG CGTCCACCCG TGCTCTTGCC GACACTGAAA TCTCACTCGA TCGACCTACA
AACACAAGCG GCGCCTAG
|
|---|
| Protein sequence | MFDKRLFELA PEARIPVFIS VVLKVVALFA NIIMMIALGR AIEGIFQGTS TLLDSGTLAL
VAVALIVRAV AGYGTQRAGD IAAVAAKKSI RTKIYNKLVS LGPAYQETVS TSEAVQLAVE
GSEQLEVYFG GYVPQLFFSL IAPVILFICL LPIAAGPACM LLACVVFIPA LIIIVRRKAT
AVAEDYWDTY ADLGSMFLED LQGMTTLKIF QADKMRHQQM NNTAEGFRKA TMRMLGVQLT
SIGAMDVVAY GGAAAGIVVA LVLLFQGSLS FAAAFAVVFL SQEFFLPMRA LGSLFHAAMS
GMASSVRIFE LLDTKETPRK DAKLTAQQCE LSCRTVGYTY PGSSATPTLH SINLDFPANS
FTGIVGKSGA GKSTLAAVLS GHADAYTGTV AINGVELRDL SASTLATLVT VVPSDSMLFA
GSIRENLQMA APCATDAAME GALGRCGILN FVRTAGGLDL VLSEGGSNLS GGQRQRIALA
RALLHDTPIY VFDEATSSID AESEKAISEV IRSMKGDRTV IVIAHRLSLV KEADNIVVLD
GGTVAEEGSH AELVQTSGLF AQLWESQRHL EERAAAAEMA ANSNVIAASR TVAASTDRVS
STAVHKTPAQ PESPESSTST SARSAASSTH QPTQAAHQPD RATSINQAAT PKRSNFAIMR
RLIKLVRPLA PRMALAITLG TIGFLAAIFL MAFASYGIVE GTLGTGASLS LLCVAAVACG
ILRGPLRYGE QLCNHDIAFR ILAYIRDVLY GALRRLAPAK LEGRAKGDLV SVATGDIELL
EVFYAHTISP IAIACIVSVI MLVFFGATVP EVVPLALASY LLVGVVLPIF ASHISGKAGE
HLREGQGRLE SFTLESLRGM RELLQFGHTQ ERGNTLTQIT NELCKVELSL KARSAAMEAA
TQAIVGSLAI GMVQFAFALA ASGTTELGAA FVVGFTFMSS FGPVLALMRL GTTLQQTFAS
GGRVLDILDE TPETLEIEDG SNIEFSGAEF DDVSFSYAGA HKQVLEQVRF AIPQGEAVAL
VGENGCGKST TLKLLMRFWD TCSGAVRISG HDVREVHTAS LRSNEGYLTQ DTHLFAGTIG
ENIRLAKPDA TDDQLRAACA KASVLTLIDS LPSGFDTPAG ELGGRLSGGE RQRIGLARIF
LQDAPFLLLD EPTSNIDALN EAAIVEALEG EKARKTIVLV SHRASTRALA DTEISLDRPT
NTSGA
|
|---|
| |