| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_10130 |
|---|
| Symbol | |
|---|
| ID | 8375220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 1149744 |
|---|
| End bp | 1150592 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644993935 |
|---|
| Product | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase |
|---|
| Protein accession | YP_003151386 |
|---|
| Protein GI | 256827427 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 81 |
|---|
| Fosmid unclonability p-value | 0.000734421 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACA CTCCAGCAGG TAGCACTTCA GAAGCTCCAT CAGCAAAAAC AAAGCTTAAA
GGGGTGAAGG GTCTTCCTGA TTATGGTACG CGCACTGATG AGATTACGCT TTATGCAGGG
CCGTGTGCAG TAGAATCGCC CGAGCAGTTT GAAACGGTTG CGCGCTGTAT TGCTTCTGCG
GGCTTGTCGT GGATCCGCGG TGGTGCTTTC AAACCACGTA CCAATCCTCA TTCATTCCAG
GGTCTTGGTG AAGAAGGCCT GCAGATTATG CATGAGTACG GCGGAAAGTA TGGTCTGAAG
ACGCTGACTG AAGTCATGGA TTCAGCCCAT TGCGAAATGG TTCATTCTTA TGTTGACGGT
CTCCAGATTG GGGCGCGTAA CTGCCAGAAT TTCAGCCTGC TCGAGAACGT TGGCGAGGTT
ACAGCTACAT CGCACAAGAT GGTGCTTTTC AAGCGCGGTT TGGCTAACAG CATTTCCGAA
TGGTTATCGG CTACCGATTA CATCACCATG AAGGGCAACG ATAACGTGGT GCTGTGCGAA
CGTGGTCTGC GCACCTTTGA GACGGCTACC CGCTTTACCT TGGATATTTC AGCGGTGCCA
GTTATTCACA AGCAGAGTCT CTTTCCTATT TGCGTTGATG TCAGCCATCC AGCAGGTGTG
CGCGACTTGG TACCGCCGCT TGCCCGCGCC GCTATTGCTG CTGGTTGTGA CTCGATTATG
ATCGAGGTTC ATCCCGACCC GGCGCATGCG AAGTCTGATA ACGCGCAGCA GTTGACCCCC
GATCAATTCC TTGATCTTCT GGCCGACTTG CGCGAAATTG CTGCGGTATT TGGCAAGCGG
ATTGTCTAA
|
|---|
| Protein sequence | MTDTPAGSTS EAPSAKTKLK GVKGLPDYGT RTDEITLYAG PCAVESPEQF ETVARCIASA
GLSWIRGGAF KPRTNPHSFQ GLGEEGLQIM HEYGGKYGLK TLTEVMDSAH CEMVHSYVDG
LQIGARNCQN FSLLENVGEV TATSHKMVLF KRGLANSISE WLSATDYITM KGNDNVVLCE
RGLRTFETAT RFTLDISAVP VIHKQSLFPI CVDVSHPAGV RDLVPPLARA AIAAGCDSIM
IEVHPDPAHA KSDNAQQLTP DQFLDLLADL REIAAVFGKR IV
|
|---|
| |