| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_09980 |
|---|
| Symbol | |
|---|
| ID | 8375205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 1132259 |
|---|
| End bp | 1133944 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644993920 |
|---|
| Product | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
|---|
| Protein accession | YP_003151371 |
|---|
| Protein GI | 256827412 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 0.000000101238 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCG CTTCACCCGC ACAATCGCGC CTCACCGATG TCGCGGATGA GACGAACACC
CCCTTACCTG TTGCTATCTT TGGTGCGTCA GGAAATCAAA CGATTTCACC TGAAGAACTG
GGTCGCGCAC ATCTTGCTGC CTTCAATGCG CTTGAAAAAC AGCTAGGGCA CCGATGGCGC
TGCACCGAAT CAAATACCAA ACAGCCAGAT GCAGCGACAG ATAATGCAAC AACATCGTGC
ACCATAACGC CATCAGGAAC TGCAACAGCA CCAACAGCAT CAAATGCAGC TGCACTATCA
TCGACGGCGA CAGGATCGGT TGTTATCCAG CCAACATCAA CTGCGACATC ATCAACGACT
GCACTATCAG CAGGCATACC TCTGCGTAAA GCGGCATACC CAGTAGTTCT TGTTCTGCAT
GCGTCAGTTG GCTCGGGACA TCGCAGCGCC GCGGTCGCCA TTGCCCAAGC ACTTGAAGAA
ATCCGTCAGA TGCAAACCGA CAATACGGCT GAGAGCGAGA CAGATGCCGT ACAATCGCCT
TCGCTACCGT CAAATTGCCG CATCGTGGTT ATTGACATAC TGGCTTGGGG TGCGCACGTC
TTCGACGGCA ATAAATATGC AACGGGTTTT ACCGGGTCAA CTCGTCCTAT CTATGACTTA
ATCTGGCGCT ACACCTTTAC TGGACGTGCG CTGTGGGGTC AGGGTACTTT TCTCAACTAT
CTTCTTTGGA GCAAGTTTAC CCGTTACCTC GCCTATATCA ATCCACTCGC TGTTGTCGCA
ACACATATTA TGGGTGCCAA TATGGCAGCT GGTGGACGCA TTATTAACCG ACAAAGTTTC
CCCCTTATCT GCGTGCCTAC CGACTACGAA ACTGAGGGTC TTTGGCCTCA CCGCGCTGCT
GACTGCTTCT GTGTGGGCAC TGAATCGATG GCTGAAACGC TGCGTGCACG CAAGGTAGAC
GAAGCGCGTA TCGCCCTTAC TGGCATTCCA ACGCGTCTCG ACTTTTGTCG CACCTATGAC
ACCGACACCG CACGCAATCG GCTGGGGCTT CCTCGCGATA AAAAACTCAT ACTCGCCTTG
GCAGGCGCTA CCCTCCCCCA ACCGTATGTC AATCTGCGTC GTATTCTCAA TGCAACCCTT
CCGGTGTTTG CTGCCCACCC TGATTTTCAC CTGGTAATGG TCTGTGGACG CGATAGCACC
TATGCTGACG GGGTGCGCTC GCTGTGTCGC GCGCTGCACC TGTCGAATGT CACCGTTATG
GAATATGTTG AAGGCATGGC AGAGCTCATG GCTTCAAGCA ACTTAATTAT CACCAAGTCA
GGTGGGCTAA CTGTGACAGA ATGTCTCTGC GCGAGCACGC CGATGATACT TGTTGGTCGT
GCCTATGGAC AGGAAAAAGC TAACGTTAAT ATGCTCACCA GTAACGGTGC TGCCATGCAT
GTAACTACCT CGCGCGAGCT TATCGATGTG CTAAATTCCA TCGACGCTCA CCCTGAACGT
ATTGCCGGTA TGGTCATGAA TGCCAATTTG CTGCGCTTGC CGAATGCGGC GCTTGATGTG
GCACGTAAAA CCGCAGCGCT CGCAAAAGCC CCCGCCAAAA ATCGCCTGGG ACATATCCCC
CGCCGTCCCG GCCCACTAGC TCTCTTCTCG TTTTATTGGG GCGATAAGCC AGCACATATT
CGCTAG
|
|---|
| Protein sequence | MDTASPAQSR LTDVADETNT PLPVAIFGAS GNQTISPEEL GRAHLAAFNA LEKQLGHRWR
CTESNTKQPD AATDNATTSC TITPSGTATA PTASNAAALS STATGSVVIQ PTSTATSSTT
ALSAGIPLRK AAYPVVLVLH ASVGSGHRSA AVAIAQALEE IRQMQTDNTA ESETDAVQSP
SLPSNCRIVV IDILAWGAHV FDGNKYATGF TGSTRPIYDL IWRYTFTGRA LWGQGTFLNY
LLWSKFTRYL AYINPLAVVA THIMGANMAA GGRIINRQSF PLICVPTDYE TEGLWPHRAA
DCFCVGTESM AETLRARKVD EARIALTGIP TRLDFCRTYD TDTARNRLGL PRDKKLILAL
AGATLPQPYV NLRRILNATL PVFAAHPDFH LVMVCGRDST YADGVRSLCR ALHLSNVTVM
EYVEGMAELM ASSNLIITKS GGLTVTECLC ASTPMILVGR AYGQEKANVN MLTSNGAAMH
VTTSRELIDV LNSIDAHPER IAGMVMNANL LRLPNAALDV ARKTAALAKA PAKNRLGHIP
RRPGPLALFS FYWGDKPAHI R
|
|---|
| |