Gene Ccur_09510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_09510 
Symbol 
ID8375158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1092921 
End bp1094546 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content54% 
IMG OID644993873 
ProductUDP-N-acetylmuramoylalanine--D-glutamate ligase 
Protein accessionYP_003151329 
Protein GI256827370 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value0.0773195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGG ATGCGACGAT TATTCCTACA ACGAAGCAGG CTCCAGCATG CTGGGGTCGC 
GTGCTTATTT TGGGGCTGGG CAAAAGCGGG CGCATTGCAG CGCATTATTG TCTGTCTCTT
CTGGGTAAAC GGGTCGATTC CGTGCGTATT GCCGCCGGTG CACGCACAAA AGAAGCACTG
GCGTTTGCCC ACGATTGCGA GCAACGCGGC GCTCATGTGA CCTTTGACGA TAGTCGCGTA
GAAGGCTCTT TCGACGTGTG CATTGCTTCG CCAGGTATTT CGGAATTTTC CGAGCTCTAT
GTGAGTGCGC GGGCTGCATC GCGCGAGATT ATGAGCGAAG TGGAATTTGC CTGGCGCGAA
AGCGATCGTG ATTCTCGGTG GATTGCCATT ACTGGCACGA ATGGGAAGAC TACGACAACA
GCACTGACGG CGCACATTTT GCAGCAAGCG GGTATGCGCG CTCGTGCGGT TGGCAATATC
GGCGACACGT GTCTTGCAGC TGTTATGGCG CACGATACCG ATGTGTATGT GGCTGAGGTT
TCGTCGTATC AGTTGGCAAG CACCATTCAT TTTGCGCCGA ATGTGGCCGT TATACTTAAC
ATCACTCCTG ATCATCTTAC GTGGCATCAA ACCCACGAAA ACTATGTTGC CGCGAAGTTT
CGCATTCTTG CGAATCTCAA TCAGACTCCT GGTGCCCTTG CAGTACTCAA TGCCGTCGAT
GAAACAGTGC GTGCACGGGT GCGTACACTT GCGCATGCTA CCGAGCAATG CGGCTTCGCA
TATATACCAG TTGGTACGGC AGCTGGTCTT GCGGGGGATA TGCGCACGAT CTGTGGAAGT
GAAAACGCCG CCTTTATTGA GGGCTCTGAT CGATGGCTAA CAGTAGCGCT TGCCAAAGAG
CAGCATCGCC TTTGTCGGGC TGATGATCTG CTGATTCCCG GTGAACATAA CGTGAGTAAT
GCTTTGGCGG CTGCCACTGC CTGTATTGCA GTTGGTGCTT CTGATGATGC TATTACGCGC
GGACTTACTA CGTTTACCGC CCTTTCACAT CGCCTTGAGG CCTGTGGAAC AATACGGGGT
GTGACGTGCT ACGACGATTC GAAAGCGACC AATGTTGATG CAACTCTGAA GGCGTTAGCG
GCATTTTCAC CGCGTCGTCC TATCGTGCTG TTGGGTGGCT CTGATAAGTT CACCGATTTA
ACGGTGCTCG TACAAGAGGC ATGCCGTCAT TGCAAGACGG TGGTGTGCTT TGGAGCTGCT
GGAGAGCGGT TTGCTCGCGC TTTTGCGGAT GCCCCTCTTC CTGTTGTGCG TGCTGCTCAT
TTAGCTGATG CGCTCGATGC GGCGCTTGAT ATCGCACATG CCGATGACAT TGTGCTTCTT
TCGCCTGCGT GTGCTTCGTT TGATGAATTT ACGTCCTATG AGCATCGCGG CGATGTATTT
AAGGCGCTTG TTGCCGAGCG CGCGCAGGCA TCAGCCAAGG ATCATGTTGC ACAGGTATCA
GCTGACGCGC CGGCTGTGCA TGAATCAGTT GAGAATCAGT CCGCGCATAT ATCAGCTAAA
AATCAGCCAA CTCAGGCTTC AGCTGTCAAC CGAGTTGCTC AGGAATCCGC TGAGGACACC
CTGTAA
 
Protein sequence
MAADATIIPT TKQAPACWGR VLILGLGKSG RIAAHYCLSL LGKRVDSVRI AAGARTKEAL 
AFAHDCEQRG AHVTFDDSRV EGSFDVCIAS PGISEFSELY VSARAASREI MSEVEFAWRE
SDRDSRWIAI TGTNGKTTTT ALTAHILQQA GMRARAVGNI GDTCLAAVMA HDTDVYVAEV
SSYQLASTIH FAPNVAVILN ITPDHLTWHQ THENYVAAKF RILANLNQTP GALAVLNAVD
ETVRARVRTL AHATEQCGFA YIPVGTAAGL AGDMRTICGS ENAAFIEGSD RWLTVALAKE
QHRLCRADDL LIPGEHNVSN ALAAATACIA VGASDDAITR GLTTFTALSH RLEACGTIRG
VTCYDDSKAT NVDATLKALA AFSPRRPIVL LGGSDKFTDL TVLVQEACRH CKTVVCFGAA
GERFARAFAD APLPVVRAAH LADALDAALD IAHADDIVLL SPACASFDEF TSYEHRGDVF
KALVAERAQA SAKDHVAQVS ADAPAVHESV ENQSAHISAK NQPTQASAVN RVAQESAEDT
L