| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_09100 |
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| Symbol | |
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| ID | 8375118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cryptobacterium curtum DSM 15641 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013170 |
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| Strand | - |
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| Start bp | 1045171 |
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| End bp | 1046439 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644993833 |
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| Product | RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003151290 |
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| Protein GI | 256827331 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.321739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 108 |
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| Fosmid unclonability p-value | 0.63498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAGCAG CTTCTCGCAC TTCTACGACA GAAAAAGTAC CTGGCAAAGA CGGCAGCAGC
CAGCCGGATG AAGAAATACA AAATCAAGCA GCTTCCGACT CTGAAGATTC AGTCGATCTG
GAAGATTTAG AAGCGCCGGA TACCGTTGGT GTTCCGGATA TTTCTGACGA TGCAATCGCG
GGGGATAAAC CCGAAGCCGA AAGCGAAGAA GATCTTCTTG AGGGAATTCC TGAAGAAGAA
CTCAAGGCTT CAAGTTCGGT GAGTCTTCCA AAGGTAACCG CTTCGAAATC ACGCATTCGC
CAGAGTTCGC GCTCTCGTGC TGCTGATACT TCTATTACGA TGCTCACCGG CGATCCAGTG
CGTATGTACT TGAAAGAAAT CGGCAAGGTT CCGCTGCTTA CGGCAGCTGA AGAAATCGAC
CTTGCCATGA AGATTGAAGC AGGTGTCGAA GCAGGCGAGC AGCTCGAAGC TGCAGAGGCC
GATAACGCCG AAGAGCTTTC CCGTCGCGAG CACAGGCGCT TGACGCGCAT TGAAGCGGTC
GGTCTTGATG CAAAGCAGCA GCTTATTGAA GCAAATCTCC GCCTGGTAGT GTCGATTGCA
AAGCGGTATG TCGGACGTGG CATGCTGTTC CTCGACCTTA TTCAAGAGGG GAATTTAGGT
CTTATTCGTG CCGTTGAGAA ATTCGACTAC ACGAAGGGCT TCAAGTTTTC GACGTATGCA
ACCTGGTGGA TTAGGCAAGC TATTACCCGT GCTATTGCCG ATCAGGCCCG TACTATCCGT
ATTCCGGTAC ACATGGTCGA AACAATCAAT AAGCTCGTGC GTATTCAGCG TCAGCTTCTT
CAAGAATTGG GACGTGAACC AACCCCGGAA GAAATTGCTG AAGAAATGGA TTTGACGCCC
GATAGAGTGC GTGAAATCCA GAAGATCAGC CAAGAACCTG TTTCGTTGGA AACACCGATT
GGTGAAGAAG AAGACAGCCA GCTGGGCGAC TTTATTGAAG ATGACGCCGC GGTGGTACCA
CCGGATGCAG CAAGCTTCAG CATGCTGCAA GAACAGCTGA CGAAGGTACT TGATGGCCTG
GCCGAACGTG AGCGCAAGGT AATTAGTTTG CGCTTCGGTC TTGAAGATGG TCATCCGCGC
ACCCTTGAAG AAGTCGGCCG TGAATTCGGT GTGACACGTG AACGTATTCG TCAAATCGAA
AGCAAGACAC TGGCGAAGCT GCGTCATCCC AGTCGTTCAA GCAAACTGAA GGACTATCTC
GAGGATTAG
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| Protein sequence | MAAASRTSTT EKVPGKDGSS QPDEEIQNQA ASDSEDSVDL EDLEAPDTVG VPDISDDAIA
GDKPEAESEE DLLEGIPEEE LKASSSVSLP KVTASKSRIR QSSRSRAADT SITMLTGDPV
RMYLKEIGKV PLLTAAEEID LAMKIEAGVE AGEQLEAAEA DNAEELSRRE HRRLTRIEAV
GLDAKQQLIE ANLRLVVSIA KRYVGRGMLF LDLIQEGNLG LIRAVEKFDY TKGFKFSTYA
TWWIRQAITR AIADQARTIR IPVHMVETIN KLVRIQRQLL QELGREPTPE EIAEEMDLTP
DRVREIQKIS QEPVSLETPI GEEEDSQLGD FIEDDAAVVP PDAASFSMLQ EQLTKVLDGL
AERERKVISL RFGLEDGHPR TLEEVGREFG VTRERIRQIE SKTLAKLRHP SRSSKLKDYL
ED
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