Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_08630 |
Symbol | |
ID | 8375071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | - |
Start bp | 987306 |
End bp | 988835 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644993785 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003151247 |
Protein GI | 256827288 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 105 |
Fosmid unclonability p-value | 0.315329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGATA TGATGGTTGA GCGCGCATCG ACGACCGAAC AGTCCGATGC ATCTGAGATA TCTGAGGTAT CGAGTGTGTC CCCTAAAACG GCGGATAGTG CGTTGGCATC TGCGCGGAGG CATGTGCTTC CGCTGCCCAT AAGTCCAAAA GGGTCACTAT TTGTTATGCT TGCCGCTTCA TTTGTGACCT GCTCGGCACA GAGCATGCTT TCGGCGGCAC TTCCGTATAT CATGTCCGAC TTTAACGTTG ATACGACACT CGCTCAGCTT TTAACCACCG GCTATTTCTA TGTGCTCGGT ATCCTCAGTG TGCTGACAGC ATTCCTTATC AATTCGTTTG ATACCCGTAA GTTGTTTCTT GCGGCGATGT GCTTCTTTGT GATGGGGTCA GGCATTGCTA TTTTTGCGCC GAACTATCCT GTGCTTCTTG CTGCGCGCTT CCTGCAAGCT GGCGGCAATG GCATTATGAT CCCGCTGATT CAGAATGTTG CCGTAGAGGT GTATCCGAAA GAACGTCACG GTTTTGCATT AGGCCTGGTT GGTATGGTTA TTGGTTTTGC GCCAGTGCTT GGTCCGGTGC TTTCTGGTGC CATCGTGCAG TTCTGGGGAT GGCGAGCGGT TTTTGATATC TTGGGTGGCC TTGGCGCAAT GGCATTGATT GTTTCTGTGT TCACCGTGCA TAATTTTGGC GAGCATCATC ACGAGGTGCT CGATATTCGG TCATGTCTGC TGTTTATTCC GGGCCTTATC ATCTTTATGG TTGGGGTTAC CTGTACTGAA CAGCAGGGTC TGTATCAGTG GTTTAGTTAT TCGCTTGATC TGTTGGGTGC ATTTCTGATT GTTGCCTTCT GTTATCGGCA GGCTCATATG GAACAGCCCC TGTTGCGTTT GTCTCTTTTC CGCGGGAAGC ATGTCATCTT GGGAGTGGGG CTTACTGCGC TTGCGCAAAT TGCCATGGTG GTCGGCACTG TTCAATTGCC GTTGTATATG CAGGAACTCC ATGGAGTTAG TGCGCTTAAT GCGGGACTTA TTTTGCTACC AGGATCATTG CTGATGGCAT TTGCCAGTCC GGTCGTTGGT GGATTTTACG ACCGTCATGG CATGCGCGTA AGTGCAACAA TTGGGCTTTC CTGTCTTGCG GCTGGATCTC TTGGTTTTAC TATCTTTGAC GGTGAAACTC CTCTGGTAGT GGTGGCACTC GTATATGGTG TTCGTATGAT TGGCTTAGCC TTCTTAATGA TGCCGATGAC CGCCTATGCT CTTGAGAAGC TTAAAGGTGG TGATGTGGCA CATGGTACCG CTATTGTTAA TTCTTTTCGC CAGATCGGCG GGGCGCTTGG ATCAAGCGTG CTCGTTGCCA TGATGTCGGC AGCCACTATG CAGCTTGATC CAGGGGCACC TACTGCTTCA GAAGGGCTTT CAGTTGTGGG GCTTAATGCC AGCTTTGGTA TCCAGGTTGC CTTAGCAATC TTTACCCTGG CTATCGTGCT TATGGTGGTA AAGCCTTTGA AGCGCCGAGA TAATAAGTAA
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Protein sequence | MPDMMVERAS TTEQSDASEI SEVSSVSPKT ADSALASARR HVLPLPISPK GSLFVMLAAS FVTCSAQSML SAALPYIMSD FNVDTTLAQL LTTGYFYVLG ILSVLTAFLI NSFDTRKLFL AAMCFFVMGS GIAIFAPNYP VLLAARFLQA GGNGIMIPLI QNVAVEVYPK ERHGFALGLV GMVIGFAPVL GPVLSGAIVQ FWGWRAVFDI LGGLGAMALI VSVFTVHNFG EHHHEVLDIR SCLLFIPGLI IFMVGVTCTE QQGLYQWFSY SLDLLGAFLI VAFCYRQAHM EQPLLRLSLF RGKHVILGVG LTALAQIAMV VGTVQLPLYM QELHGVSALN AGLILLPGSL LMAFASPVVG GFYDRHGMRV SATIGLSCLA AGSLGFTIFD GETPLVVVAL VYGVRMIGLA FLMMPMTAYA LEKLKGGDVA HGTAIVNSFR QIGGALGSSV LVAMMSAATM QLDPGAPTAS EGLSVVGLNA SFGIQVALAI FTLAIVLMVV KPLKRRDNK
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