| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_08590 |
|---|
| Symbol | |
|---|
| ID | 8375067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 984125 |
|---|
| End bp | 984637 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644993781 |
|---|
| Product | rrf2 family protein, putative transcriptional regulator |
|---|
| Protein accession | YP_003151243 |
|---|
| Protein GI | 256827284 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 105 |
|---|
| Fosmid unclonability p-value | 0.196859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTGA CCCGCCGTTG CGACTATGCC TGCCGTATTC TGCGCAGTGC TTACCGCCAC
CGAGACCGTT TTGTGTCGGT TGCTGAAATC TCTGAGGAAG AAGAGATTCC CTATGCCTTT
GCCCGCACCA TTCAGCATGA TCTTGTGCAA GCGGGGTATG TACGTACGGT ACGGGGCGCA
CATGGTGGAT TGCAGCTTGC GATTGATCTT TCGCAGGTAA CGGTGCTTGA TGTATTGCAT
GCATTGCAGG GTGAGGTAAC GGTGTCGGCT TGTGCGGCTG ATCCGCAGTC ATGTTCAAAA
AGCGAGGGTT GCCGTTTCAA CCAGCTCTGG CAAGTTGCCG ATAAAATGCT CAACACGCTG
TTCGATTCGG TAACGCTTTC CGATATGTTT GAGTCAACAA GTTCAAATAT CCCTGCTTCA
ACCATTGAGG CGGCGGATGA GGCGGTACGT ACGAGTCTTG ATGAGCTTCT CGATGGACGC
GCTCCCACGT CGTGCGCGGT TACTTGCAAC TAA
|
|---|
| Protein sequence | MELTRRCDYA CRILRSAYRH RDRFVSVAEI SEEEEIPYAF ARTIQHDLVQ AGYVRTVRGA
HGGLQLAIDL SQVTVLDVLH ALQGEVTVSA CAADPQSCSK SEGCRFNQLW QVADKMLNTL
FDSVTLSDMF ESTSSNIPAS TIEAADEAVR TSLDELLDGR APTSCAVTCN
|
|---|
| |