Gene Ccur_08540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_08540 
Symbol 
ID8375062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp977845 
End bp979491 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content53% 
IMG OID644993776 
ProductNi,Fe-hydrogenase I large subunit 
Protein accessionYP_003151238 
Protein GI256827279 
COG category[C] Energy production and conversion 
COG ID[COG0374] Ni,Fe-hydrogenase I large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones107 
Fosmid unclonability p-value0.481337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTA CCGTAATCGA TCCGATCACC CGTATCGAGG GTCATCTGCG CGTCGAGATG 
GAAGTCAACG ACGGCATGGT TACTGACGCG TGGGTATCCG GTGGCTGCTT CCGCGGCATG
GAATTGGTGG TGCGCGACCG CACACCCGAA GATGCTGCCA TGATTGTGCA GCGCATCTGT
GGTGTCTGCC CGGTTTCGCA TGCACATTCT GCTTCTATTG CTGGCGAGAA AGCCTATGGC
ATCACTATTT CAAACAACGC ACGCATCATC CGCAACCTGG TTGAAGCAGC GCAGTTCATG
CATAGCAATA TTCTCTGGTT CTATAACCTG GCGGCGCTGG ATTATGTGAA CCCGCTCAAC
GCGCTGACGG CAAATGTTGC TGATGCGTAC GATCTTGCTC AGGCAGCGGG CACATCGACC
ATGAGTGATC TCGGCGCAGT GAAGAAAAAA CTGCAGACGT TTGCCGCCAA TAAGCAGCTG
TCTATTTTCA GTGGCAACTG GTTTGATGCT GAAAATAACG ATGGCTACCA ACTGACGCCA
GAGCTCGATC TTATTTGTAC GGCTCATTAT CTTGAAGCGT TGCGCATGCA GGCGAAGGCG
AGCGAGATTG CTGGTTTGCT CGGCGGCAAA ATGCCTCACA TTATGACAAG CACCGTCGGT
GGCACCATGT TTGTGCCGAC CGAAGAAAAG CTTGACGATC TGTGGGCGCT GGTCAACGAA
CTATATGATT GGGTTGAAGC GACGATGCTT CCCGACACCC TGGCTATTGC ACCGTACTAT
GCTGATGCAT TCGAATTTGG CCGTGGTTGT GGTCGCTATA TCGCATGGGG CGTATTTGAC
GATACGAGCT TCGATATGAC GAAGCGCTAT CTGCCCGCCG GTGTCTTAAA CGATGGATTC
GCACTCGAAG AGGTCAACGA GGACGCCATT AGCGAATATG TTGGCCATTC CTGGTACGAG
GGCTCGTCCG ACTTGAATCC GCGCGAAGGC GAAACAAAGG CCGAATTTAC CTCGTATGAC
GTTGCTGATC GCTATAGCTG GGTTAAGGCT CCTACCTACA ACGGTAAAGC CATGGAAGCC
ACGTCGATGT CTCGTATGCT TGTTGCCTAC AAGCGCGGCG TGCCGTTTAT TGTCGAGCAT
GTTGACGCTC TGCTTGAAGC ATTGGGTGCA CCGGGCCGTA TCGACATTGT GCCGTCTACG
ATGGGCCGCA CGGGCGTTCG CCAGATCGAA ACGCTCTATA TTGCTGGCCT TATGAAAGAT
TGGGTCCGCG AGCTTATTGA AGCTATCAAA GGTGGCGACA CTGAGTACTT CCGTCCACCG
ACTCGCACAA CTGGTGAAGG ATCTGCTTTC TGGGAGGCAC CGCGTGGTGC TCTGTATCAC
ACCGAAAAGG TCAAGGACGG CAAGATTACC GACTACCAGA TTATTATTCC AAGTACGTGG
AACCTTGCGC CAATTAATGG ACATGGTGAA CATGGTCCAC TTGAACAGGC GCTTATTGGT
GTACCCGTTA CCGATCTCGA GAAGCCTATC AATGCCCTGC GCACCGTTCA TAGTTTTGAT
CCATGTACAG CGTGCTCGGT GCATATTACG GAGCCGGCAA CCGGTAAGAA GTTCCAGACG
GTCACGAATC CTTGGGGAGT GAGGTAA
 
Protein sequence
MARTVIDPIT RIEGHLRVEM EVNDGMVTDA WVSGGCFRGM ELVVRDRTPE DAAMIVQRIC 
GVCPVSHAHS ASIAGEKAYG ITISNNARII RNLVEAAQFM HSNILWFYNL AALDYVNPLN
ALTANVADAY DLAQAAGTST MSDLGAVKKK LQTFAANKQL SIFSGNWFDA ENNDGYQLTP
ELDLICTAHY LEALRMQAKA SEIAGLLGGK MPHIMTSTVG GTMFVPTEEK LDDLWALVNE
LYDWVEATML PDTLAIAPYY ADAFEFGRGC GRYIAWGVFD DTSFDMTKRY LPAGVLNDGF
ALEEVNEDAI SEYVGHSWYE GSSDLNPREG ETKAEFTSYD VADRYSWVKA PTYNGKAMEA
TSMSRMLVAY KRGVPFIVEH VDALLEALGA PGRIDIVPST MGRTGVRQIE TLYIAGLMKD
WVRELIEAIK GGDTEYFRPP TRTTGEGSAF WEAPRGALYH TEKVKDGKIT DYQIIIPSTW
NLAPINGHGE HGPLEQALIG VPVTDLEKPI NALRTVHSFD PCTACSVHIT EPATGKKFQT
VTNPWGVR