| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_08420 |
|---|
| Symbol | |
|---|
| ID | 8375050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 962339 |
|---|
| End bp | 964699 |
|---|
| Gene Length | 2361 bp |
|---|
| Protein Length | 786 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644993764 |
|---|
| Product | primosomal protein N' |
|---|
| Protein accession | YP_003151226 |
|---|
| Protein GI | 256827267 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.181256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 107 |
|---|
| Fosmid unclonability p-value | 0.746709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCTT CAACAGTGTC CTGCATGAAA TTCGCGCAGG TTGTGCTTGA TATTCCCACT
CAAGCCCTTG AGGGTTCGTA TGTGTATGCC GCGCATTCCG ATTTGGGCGA TATTGAAGTA
GGTTCACCAG TCCTTGTTCC CTTTGGGGGG CGATCTGCTG TTGGTTTCGT GATGAAGATG
CTGTCGCTTG ATGAGCTTGC ACCTGAGGCA GTAGAAGAGG CCCTTGGGTG TGATTCTCAT
AAAGTAAAAC CAATCACGCG CCTGCTTGGT CGTTCGCTCT TTCCGCGCGA GTCGGCCGCT
TGTGCCCAAT TTCTTGCTCA GCACTATATT GCACCGCTTG CCAGTTGCGT ACGTCTCTTT
ACGCCGCCGG GTGGTGTGCC GCGCATGGTG CACGGGCGCG ACGGCTGGTA TCTTCGTGAT
GCGTCGGTTG GTAAGGTTGA CGATCGCTGG GTGCGCTTAG CAGTGGGTGC GCGTGAATTT
CACCCGCGTA AGCAGGCAGT CAAGCAGCGC GCTATTATTG CAGCACTGGA TGCTGGTGAA
CTGCGGGTAG CTGATCTGCG TGCTGAATAT GGATCGGTTT CTGCCACACT GCGATCGCTT
GCAACAAAGG GCGTTATTGA AATTTTTTCT CGCCGACGCA TGCGTGGTAC AAGCGTTTCA
AACACACCAA CATCTGGCTG CGACTATGGA TTGTGTACTC TTGATGCGGC CCATAAGCCT
CATCTAACGC CGGGTCAGCA ACGTGCGGTT GCTGCAATAT CGAAGGCTTT TCAAGCGCAC
AGTGGGCAGG TAGTGCTTGT CGATGGGGTA ACGGGTTCGG GCAAAACCGA GGTCTATTTG
CGTGCCATTG AAGAAGTGGT GCGATCGGGT CGTAGTGCTA TTGTGCTTGT TCCTGAAATA
TCGCTTACTC CGCAAACGGT TGCGCGGTTT CGCGGGCGCT TTGGCGACAT GGTTGCCGTG
CTTCATTCAC GGATGGGGAC AGGAGAACGT TTCGATCAAT GGGATTTCAT CCGTTCGGGT
GAAGCCCGTG TGATTGTGGG TGCACGCAGC GCGCTGTTTG CGCCTGTTGC CGATTTGGGG
CTTATTGTTA TCGATGAAGA ACATGAGGCT TCCTACAAAC AGGATAGTGC CCCACGCTAC
GTGACGCGTG ATGTTGCGGC ATGGATGGCG CGCGAGCGGG GTGCAGCGCT GGTGCTTGGG
TCGGCGACCC CTTCTATTGA GGCGATCTTT CGCGTTCAGC ATGATCCTAC CTGGACGGCC
GTTGAACTGC CCGAACGAGC CAATGGCAAG CCTCTGCCTT CTATTGAAGT TGTTGACATG
GCACACGAAT TTTCTGCGGG AAGTCGATCC ATGTTTTCGC ATCGTTTGCA GCAGGCTTTG
CGCGAAACAC TTACAGCGGG GAACAAAGCG GTGCTCATGC TCAATCAACG TGGGTTTGCG
CAGTTTGTCC TGTGTCGCGC ATGTGGCTTT GTACCTCAGT GTCCTAGCTG TTCAACCTCG
TTGACCTTTC ATGAAAAGGG CAATGTACTC ATGTGTCATC ACTGCGGTTT TCACATGACA
ACGCCCGCTG TCTGTCCGCA GTGTGGCAGC CCCTATCTCA AGCGCTTCGG GGCAGGTACG
CAGCGGGTTG AAGCTGAACT TGCTAGCATA CTTGCCGGCT TTTCCGATGT TGATGCGCAT
ATCGTGCGGA TGGATGCCGA TACGACCGCA CGCAAAGGGG CGCATCAAAA GCTGCTTGAG
GAATTTGCTG CTGCCGACGC TGCGGTACTT TTAGGTACTC AGATGATTGC CAAGGGACTC
GACTTTGATG ATGTGACGCT TGTCGGTGTT ATCAACGCCG ATACGCAATT GCGCCTACCC
GATTTCCGCA GCGCTGAGCG TACATTCGAT TTGATTGAAC AGGTAGCAGG TCGTTCGGGT
CGCGCGCAGT TGCCTGGTCG CGTTATCGTG CAGACTTATA GTGCCACGTC AATCGCTATT
CAGGCGGCAG CTCACTATGA TCGCACGTCA TGGCTTAACC ACGAACTTGA AAGCCGAAAA
TCGCTGGGGT ATCCGCCATT TGTTCGTCTT GCCGATGTGC TGGTGTGGGG TCGTGACGAG
GCTGCTGTGC GGCGTGAAGC AGGCGAGCTA TATCGTCGCA TGACAGATGC TATCGATGAA
CATACGCAAG GCGATTGGAC CATACTGGCG CCAACACCGT GTGTACTTTC GCGCCTGCGT
GGTTCGTGGC GCTATCACAT TACGGTAAAA GCACCAGCTA CTGCAGATAT CGCGCGGGTG
CTTACACCGG TGTTTCGATC GCGGCGCGCA ATGCATGAAT TGTCTGTTGC GGTTGATATC
GATCCAGCAA GCATGCTCTA A
|
|---|
| Protein sequence | MEASTVSCMK FAQVVLDIPT QALEGSYVYA AHSDLGDIEV GSPVLVPFGG RSAVGFVMKM
LSLDELAPEA VEEALGCDSH KVKPITRLLG RSLFPRESAA CAQFLAQHYI APLASCVRLF
TPPGGVPRMV HGRDGWYLRD ASVGKVDDRW VRLAVGAREF HPRKQAVKQR AIIAALDAGE
LRVADLRAEY GSVSATLRSL ATKGVIEIFS RRRMRGTSVS NTPTSGCDYG LCTLDAAHKP
HLTPGQQRAV AAISKAFQAH SGQVVLVDGV TGSGKTEVYL RAIEEVVRSG RSAIVLVPEI
SLTPQTVARF RGRFGDMVAV LHSRMGTGER FDQWDFIRSG EARVIVGARS ALFAPVADLG
LIVIDEEHEA SYKQDSAPRY VTRDVAAWMA RERGAALVLG SATPSIEAIF RVQHDPTWTA
VELPERANGK PLPSIEVVDM AHEFSAGSRS MFSHRLQQAL RETLTAGNKA VLMLNQRGFA
QFVLCRACGF VPQCPSCSTS LTFHEKGNVL MCHHCGFHMT TPAVCPQCGS PYLKRFGAGT
QRVEAELASI LAGFSDVDAH IVRMDADTTA RKGAHQKLLE EFAAADAAVL LGTQMIAKGL
DFDDVTLVGV INADTQLRLP DFRSAERTFD LIEQVAGRSG RAQLPGRVIV QTYSATSIAI
QAAAHYDRTS WLNHELESRK SLGYPPFVRL ADVLVWGRDE AAVRREAGEL YRRMTDAIDE
HTQGDWTILA PTPCVLSRLR GSWRYHITVK APATADIARV LTPVFRSRRA MHELSVAVDI
DPASML
|
|---|
| |